Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02270 ATGTCGGCCTCGTGCGGGGTGGTGGAGTGCGTCTTAGTGCTGGGCTGCGCGCGGTGGCTCTGGAAGCGCTGCACCTACGTCGGCAGCTACGATAGCGCCACTTGGACGGCCGCCACCGCCGACGAATTCGACTCCGTACCACGTGTCTGCCGCCTCATCCTCGCCAACTACGAGACCGATCTCCGAAATCCGAAGTACTACAAGCCCGCCTCCGGCTACCGCCTGAACCCGGACTGGGTCGTGAAGCGCGTGACTTACGAGGAAACTCTCGGCCAGGCGCCGCCCTACCTCATCTACCTCGACCACGAGCACAAGGAGATCGTGTTGGCGGTGCGTGGCCTCAACCTGGTCAATGAGAGTGACTACAAAGTCCTCCTTGATAACCGGTTGGGGCAGCAGATGTTCGACGGCGGGTACGTGCACCATGGCCTGCTGAAATCGGCGGTGTGGCTGCTGAATAGGGAGTCGGAGACGCTGAAGCAGTTGTGGTTGGATAACGGTCCGGAGTATGACATGGTGTTCGCGGGACATTCTTTGGGTTCTGGGGTGGTTTCGTTGTTGACGATTTTGGTTGTAAACCATAGGGACCGCTTGGGTGGGATTCCGAAGGAGAAGATTCGGTGTTATGCGGTTGCTCCTGCCAGGTGTATGTCCCTCAATTTGGCTGTCAAGTACGCCAATGTCATTCATTCTGTTGTTTTGCAGGATGATTTCTTGCCAAGAACGCCCACTCCTTTGGAAGATATATTCAAATCTATATTCTGTTTGCCCTGCTTATTGTTCTTGGTTTGCCTGAGAGACACCTTCATACCTGAGGGTAGAAAGCTTAGAGATCCAAGGAGACTTTATGCACCTGGACGAATGTACCATATTGTGGAGAGAAAATTTTGCAGATGTGGGAGATTTCCTCCTGAAGTGAGGACTGCTATACCTGTTGAAGGAAGATTTGAACATATTGTCTTGTCCTGTAATGCAACATCAGACCATGGAATTATTTGGATTGAAAGGGAGGCTGAGAAAGCCTTGCATCTAATGAAGGAGCAGAGCTCTGAAACTGTGACAGACCCTCCAAGGGTACAAAAGTTTGAGAGGTTGAAGACCATAGAGAAAGAACATAGAGATGCTTTAGAAAGGGCTGTTAGTTTAAACGTGCCTCATGCAGTGGAAAGTGCAGAGAAAGGAGCGTCAGAGAACAATGAAGGTGAAGAAGCATCGGGTAGTGGTGGAAGGTCAAACTGGGATGAGGTTGTTGAAAAACTCCTAAAGAAGAGTGAGACAGCAGAACCAAAGCAGGAAAGGGATACCAATGTCTCACAATAA 1320 0.5098 MSASCGVVECVLVLGCARWLWKRCTYVGSYDSATWTAATADEFDSVPRVCRLILANYETDLRNPKYYKPASGYRLNPDWVVKRVTYEETLGQAPPYLIYLDHEHKEIVLAVRGLNLVNESDYKVLLDNRLGQQMFDGGYVHHGLLKSAVWLLNRESETLKQLWLDNGPEYDMVFAGHSLGSGVVSLLTILVVNHRDRLGGIPKEKIRCYAVAPARCMSLNLAVKYANVIHSVVLQDDFLPRTPTPLEDIFKSIFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVEGRFEHIVLSCNATSDHGIIWIEREAEKALHLMKEQSSETVTDPPRVQKFERLKTIEKEHRDALERAVSLNVPHAVESAEKGASENNEGEEASGSGGRSNWDEVVEKLLKKSETAEPKQERDTNVSQ 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02270 439 MobiDBLite consensus disorder prediction 377 439 - -
Spst1g02270 439 CDD Lipase_3 42 244 - -
Spst1g02270 439 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 429 - -
Spst1g02270 439 Pfam Lipase 3 N-terminal region 8 71 IPR005592 GO:0016042
Spst1g02270 439 Pfam Lipase (class 3) 108 244 IPR002921 GO:0006629
Spst1g02270 439 SUPERFAMILY alpha/beta-Hydrolases 38 246 IPR029058 -
Spst1g02270 439 Gene3D alpha/beta hydrolase 31 258 IPR029058 -
Spst1g02270 439 MobiDBLite consensus disorder prediction 415 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02270 Spst-Chr1 31376293 31379864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02270 1 344 Miscellaneous Gene Families AT5G37710 73.837 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02270 - - gmx:100798831 771.155