Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02263 ATGGAAATAAGAATTGCAAGGTCTCATCTTCAAACACAGGGAATGTTCTTTTCAAATATTTCAAGAACATTAGGATGGGAAAGCGCTAAGAAACTTCCATTTAATGTGGCTGCCCTGAGTTCTACACGGGACTTTCACAGATTGGCCTCTTCCTGTCAAGCTTTTACTGCAGTTTATCGTAGAAGGCATTTTATCAGTAGAGCGAATTCTATGCCGATTAGTTTACAGGAATCTGCATCATATGGAGATAATTCTGTTGAAGATGAGAATCCATCTATAGACTCAGAGGAGATTTTGGCAAAACCACTTACCCGTGAACAGATAATGGCACTGCTTGCTGACACACAGAGAGCAGAACTCACCAAGAAGCTTAGTGAAGCCAACCAGCAAAATCGGTTCCTAAAAAGACAGTTGGTTGCAAAGGAGGATGCGTTGGTAAAATTCAAAAGTGAACTTGCTGTCATGGAGCTTGAAATCCAGGCTTTGGCCAGACTAGCAGATGAAATAGCTCAATGTGGTATTCCGGAAGGTTCAAGGAAGATCAATGGAAAGTACATTCATTCTCACCTTGTTGCAAGATTAGAAGCTGTAGATGAACAACTGAAGGAGCAAATAAAGGATGTTGAAGTGGCACAATCAAAGGAGGTTTCTGTGTTTTGGATTGGTATGGCTGAGAGCGTGCAAGTTATGGGAACCTTTGATGGCTGGAGCCAAGGAGAGCACCTTTCTCCGGAGTATACTGGTTCTATCACAAGATTTTCAACAACATTGTTGCTCAGGCCAGGAAGGTATGAAATCAAATTCTTAGTAGACGGTGAATGGCAGCTGTCACCAGAGTTTCCCATTATTGGTGAAGGGTTAACGAAAAACAATTTGTTAATTGTTGAATAA 891 0.413 MEIRIARSHLQTQGMFFSNISRTLGWESAKKLPFNVAALSSTRDFHRLASSCQAFTAVYRRRHFISRANSMPISLQESASYGDNSVEDENPSIDSEEILAKPLTREQIMALLADTQRAELTKKLSEANQQNRFLKRQLVAKEDALVKFKSELAVMELEIQALARLADEIAQCGIPEGSRKINGKYIHSHLVARLEAVDEQLKEQIKDVEVAQSKEVSVFWIGMAESVQVMGTFDGWSQGEHLSPEYTGSITRFSTTLLLRPGRYEIKFLVDGEWQLSPEFPIIGEGLTKNNLLIVE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02263 296 PANTHER PROTEIN PTST, CHLOROPLASTIC 7 296 - -
Spst1g02263 296 SUPERFAMILY E set domains 216 295 IPR014756 -
Spst1g02263 296 CDD E_set_AMPKbeta_like_N 215 295 - -
Spst1g02263 296 Gene3D Immunoglobulins 206 295 IPR013783 -
Spst1g02263 296 Coils Coil 191 214 - -
Spst1g02263 296 Pfam Glycogen recognition site of AMP-activated protein kinase 217 286 IPR032640 -
Spst1g02263 296 FunFam Protein PTST, chloroplastic 208 296 - -
Spst1g02263 296 Coils Coil 117 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02263 Spst-Chr1 31265241 31272826 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02263 - - gmx:100795997 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02263 1 31265241 31272826 Spst1g02263 1 31265241 31272826 ECH