Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02257 ATGAGGAGGCAACGGAGGTGGCGCACAGTGGTAGATCACGGAGGTGCTGGTGCGCCGGCGAAGACTGTGGCCGCGAAGGTAACGTGTAGTGGTGGTGGCCGCGACTCGAGGGTGGAGGCGCGACGCGGGGCGGAGGCAAGGTTGGCCGTGCAGGATTGCTGGCAGAGAAAAAGGTATGGACTTCGGTTTGTTCTTATATGGATTGCTTTTGGTTTTGTGTTTCGGGCTTTATTGGGTATTTGCCCGTCCGTTTACTTTGTAATCTATCTGCTCCCCCTCTTTCAAATCCCCATTTGTTCAATCCATTGGGTTGCAAGAATTCAGGGTGAATGTTGGTGGCTGGCAGAGGGAAGGTGGCCCTTGCAGAGAGAGGGTCGCTGTAGGGTGGCCGTGGGGCTTCTGTTGATACCTACTGGTGGTTGCAGGTGGCTGGGGATGGAAACACGAAAATGGGTCCGTCTTCTCTGCGAAGGAGAAAGGGGAAGACTGATGTATTTTGTAAAAATTCAATTGTTTGATTGTGTTTATGTATTGGGTTTATTGCAGAAGCAAAGAATACAATCTCTTTGTGTTACTTCCTTCTCTCTCTCTGGTGTCTTACAAATGAAAATCTTGGAGGCAAATGCTGGTGCACTCACAAATTTTGAGGTCCTTGATTTCTTACGAGCTAAAGGAGCTTCAAAGGATCCGACAAGGGTTATTGCCAAAGTAGCGCAGTCTGAATATAAGGTTTATGATTATTTGGTTGGCACTGCTGCCTCTGATCAAACAAAAGAGACCATCAATGAGTTTTTGACAAGTATTAAACAGCATGACCTGGCAAAAGCTGAGGTTCTGAACATATTAAACACTAGACCAGTTGCTGATGTTGAAATATTCCCTATCATAGAGAATTGTGAGGGGCGTTTCTCAGATGACGAGGTGAATGAAATAGTAGAGCTGGTGAAGAAAACATTGCCGCCACCTCCCAATATGAAGCAAGATGAAATCACCAAAGGGTGA 1002 0.4691 MRRQRRWRTVVDHGGAGAPAKTVAAKVTCSGGGRDSRVEARRGAEARLAVQDCWQRKRYGLRFVLIWIAFGFVFRALLGICPSVYFVIYLLPLFQIPICSIHWVARIQGECWWLAEGRWPLQREGRCRVAVGLLLIPTGGCRWLGMETRKWVRLLCEGERGRLMYFVKIQLFDCVYVLGLLQKQRIQSLCVTSFSLSGVLQMKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVAQSEYKVYDYLVGTAASDQTKETINEFLTSIKQHDLAKAEVLNILNTRPVADVEIFPIIENCEGRFSDDEVNEIVELVKKTLPPPPNMKQDEITKG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02257 333 Pfam RNA polymerase Rpb4 211 318 IPR005574 GO:0006352|GO:0030880
Spst1g02257 333 Gene3D - 196 320 IPR038324 -
Spst1g02257 333 FunFam RNA polymerase II, Rpb4, core protein 202 320 - -
Spst1g02257 333 PANTHER CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN 202 329 IPR038846 GO:0005666|GO:0006384
Spst1g02257 333 SMART rpol4neu2 202 322 IPR006590 -
Spst1g02257 333 SUPERFAMILY HRDC-like 200 320 IPR010997 GO:0000166|GO:0044237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02257 K25304 - gmx:100789488 213.001