Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02238 ATGCAATTTCCAAAACGACCTATGCTACCTAATGCTGATGACCTTTGCTTCATCACACCACTTGTGAACTCGACAGAAGTAAATTCCAAGTCCCCTGCTGCTCATAGAATGGCTTCTCCAGCACTGAGTTTGAGGCCTCAAAAGCCTTCAATAGTGTTGTTCTTTATATGCATTTCATTTTCATATTCTGTTGAAGAAGCCATAATATCTTCTAAGAAGTTAGACCAACCACTGTTTCCACCACCAGCAGAGACTGAAATCAAGTGTGGATCATGTCCTTGTGGAGACACCTGTGGTGAGCAGCTTCCACCACCCCCACCACCTCCTTGTCTATCGCCGCCTCCGCCACCGCCACCACTGCCATCACCACCGCCTCCACCGCCAACATCACCACCTCCTCCTAAGTTTCCCACATGTCCTCAGAACTGCAATCCCTTGCCACCTCCACCACCACCGAGATTCGTATACGTGCCTGTGCCAGGTGTTCCAAAACCATATACTTGGGTATATTATTATTCTGGTGCTGAGAACAGAGCAGTGGGGTTGCTTGTTTTGGCTGGTTTGGGAGGACTATCATTGGCAACGCTACTTTTGGATGACATCATGAAGCTAAATTTACATTCTTGA 627 0.4737 MQFPKRPMLPNADDLCFITPLVNSTEVNSKSPAAHRMASPALSLRPQKPSIVLFFICISFSYSVEEAIISSKKLDQPLFPPPAETEIKCGSCPCGDTCGEQLPPPPPPPCLSPPPPPPPLPSPPPPPPTSPPPPKFPTCPQNCNPLPPPPPPRFVYVPVPGVPKPYTWVYYYSGAENRAVGLLVLAGLGGLSLATLLLDDIMKLNLHS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02238 208 PRINTS Proline rich extensin signature 121 137 - -
Spst1g02238 208 PRINTS Proline rich extensin signature 97 118 - -
Spst1g02238 208 PRINTS Proline rich extensin signature 148 165 - -
Spst1g02238 208 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 44 129 - -
Spst1g02238 208 MobiDBLite consensus disorder prediction 105 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02238 Spst-Chr1 30835333 30836044 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02238 - - gmx:102666273 165.236