Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02202 ATGCAAATGCAAACTGGTCTTAATGCGACAAAGGATCAATATGAGCAATGTGGGGCTGGATATCCAAACAAAACTACTGTCGCATGCATGATAAATGCAGAAATTAGTGCAGTGTTGGCAGTTATGCGAAGAAATGTCAGATGGGGAGTTCATTACATGTCAAATGATGACCAGACAGAGCACTTTCTTGTTCAGTCATTAAAGACGTTAAGGAGGCAAATTTTCTCATGGCAGAATCAATGGCATTCCATCAACCCTACCTTGTATCTCCAGCCCTTTTTGGATGTGATACGATCAGATGAAACTAGTGCGCCTATTACTGGTGTTGCTTTGTCATCTGTTTACAAAATCTTAACTCTAGATGTGATTGATCAACACACTGTCAATGTTGGGGATACCATGCACTTCGTGGTTGATTCTGTCACTAGTTGCAGATTTGAAGTGACCGATCCTGGATCAGAAGAAGTGGCATTAATGAAGATTTTACAAGTTCTTCTAGCTTGTGTGAAAGGTAAAGCATCTGTCATGCTGAGTAACCAACACATTTGCATCATAGTGAATACATGTTTCCGAATAGTTCATCAAGCAGGAACTAAAGGTGAGCTGTTGCAACGAATAGCACGGTACACAATGCATGAACTGGTTAGGTCTATATTTTCTCACCTTCAGAATATTGACAATACAGAGTGTGAATTCATAAATGGGAGCGCTACCTTAAAACAAGAGACCACTGGACTAAGTAATGACCATGCTTTGGCAAGCAGAGAATTGGAAAATGGGAGCCTTAATTCTGCATACGATGCTCAACCATTATCTAAAATCATTGCTTCCAGCACTGCAATTGCAAATGTCGTGGATGAAAACACAGCTATTGCTAGCAGTGGCAATGAGACTGATCCACACGAATTACAGATTATGATTAAACCATATGGAGTTCCTTGTATGGTGGAAATATTTCACTTCTTGTGTTCTTTGCTGAATGTCTCTGAGCATAGGGGAGTGAATTCTAGATCAAACACAATGACGTTTGATGAAGACGTGCCTCTTTTTGCATTAACTTTGATTAATTCAGCCGTTGAGTTGGGAGGGCCATCCTTTCGCCGTCACCCACGACTGCTGAGTTTAATTCAGGATGAATTATTCTGCAATCTTATGCAATTTGGTTTATCAATGAGTCCTCTTGTACTTTCAATGGTGTGCAGCATTGTTCTCAATTTGTATCAGCATCTTCGTCCAGAACTCAAATTACAGCTTGAAGTATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAATATGGGGCCTCATATCAGCAACAGGAGGTTGTGATGGAAGCACTTGTTGATTTTTGCAGGCAAAAAACATTCATGATTGAGACGTATGCTAACTATGACTGTGATATAAGTTGCAGTGATGTCTTTGAAGATATTGCTAATTTGTTGTCCAAAAATGCATTTCCTGTGAACAATCCATTATCTTCTATACATATTCTTGCCTTAGATGGTCTTATTGCTTTAATGGATGGAATTGCAGAAAGAATAGGTAGTGGCTCTCTAAGTTCAGAAGAATCTCCTGTGAATTTTGAGGAGTATACACCATTTTGGATGGAAATGTGTGACAATTTTGATGACCCAAATGATTGGGTTCCTTTTGTCCGCCAAAGAAAGTGCATAAAGAGAAGATTAATGATTGGAGCTGATCACTTCAATCGGGATATTAAGAAAGGTCTTGAGTTTCTCCGAGGAACACATCTTCTGCCTAACAAACCTGATCCCCAAAGTGTTGCCTGCTTTTTAAGATACACAGCTGGGTTGGATAAGAATCTCATTGGTGATTTCCTAGGAAATCATGATGAATTTTGTGTTCAGGTTCTTCATGAATTTTCTAGGACATTTGATTTCCACGATATGACCTTAGACACAGCCCTACGTGTATTTTTAGAGACTTTTAGGCTTCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAATCTTTCTCTGAGAGATATTATGAACAATCACCAGATATCCTAGCTAACAAGGATGCTGCTCTCGTGTTATCATACTCGATGATATTGCTTAATACAGACCATCATAATGTGCAGGTCAGAAAGAAGATGACGGAAGAGGATTTTATCCGAAATAATAGGCATATAAATGGTGGTAATGATCTGCCTCGAGAATTTCTGTCAGGGATTTACCATTCAATTTGTAAGAATGAAATTCGTACCACTCTTGAACCGAGCTTTGGATTTCCTGAAATGACCCCAAGTCGGTGGATTTCTCTGATGCACAAGTCAAATAAAACTGCTCCATACATTGTATCGAATTCCAGATCATACTTAGACTATGATATGTTTGTGTTGTTGTCAGGCCAAACAATTACTGCCATTTCAGTGGTTTTTGATGATGCTGAAAATAAAGAGGTATATCAAACATGTATTGATGGATTCTTAGTCGTTGCTAAGATATCAGCCTACTATAATCTTGAAAATGCACTTAATGATCTCGTCGTGTGCCTCTGTAAGTTCATTGCCATTTTGGATCCATTATCAGTTGACGAATCTGTCCTGGCCCTTGGAGATGACACAAAAGTAAGAATAGCAACTGAGACAGTTTTCACTATTGCAAATAGGTATGGTGATTACATCCGCACAGGGTGGAGGAATATCCTTGATTGCATCTTAATATTTTACAAGTTAGGACTAATTCCTACACGCTTGGCCAGTGATGCAGCTGATGAGTCACGGGTAACTACTGAGATTGGACATGGAAAGTCTAACTCAAATTCTTTATTATCATCAAATATTCAACATATTATTCCAAAGAGATCCTCAGGATTAATTAGCAGGTTTAGTCAACTCTTATCACTTGGCTCTGAAGAGATACAATCAATACCTACACAAGAACAGCTGGTTGCTCTTCAGCGAGCTACACAAGCAATTCAAAAGTGTCAGATTGATAGCATATTCACTGAGAGCAAATTTCTGCAAGCTGAATCTCTATTGAATCTTGAAAGAGCGCTCATTAATGCTGGAACTCAACATCCGAAAGGAAACAGAATATCTGAGGATGAAGATCCTTCAGTTTTCTGCCTTGAGTTATTGGTGGCAATCACTCTGAATAACAGGGACAGAGTTGTACTTATTTGGAAGGGTGTTTATGAGCACTTATCCAATATTATTCGGTCGACTGTGATGCCTTGTGCTCTGGTAGAAAAGGCTATTTTTGGACTTCTTAGAATTTGCCATCGCTTACTTCCCTACAAAGAGAACATTACTGATGAACTTTTGAGGTCCCTGCAACTTGTCTTGAAGCTTGACGCACTAGTTGCAGATGCATACTATGAGAAGATTACTCAGGAAGTCAGTTGCCTTGTGAAGGCAAATGCTTCTCATATTAGATCTCAGTCTGGATGGGGGACTATTACAGCACTTCTTTCCATCACTTCTAGACACCTGGAATCATCTGAGGCTGGATTTGATGCACTGCTGTTCATTATGTCTGATGGAGCTCACTTGCTCCCTGCTAATTACATCCTCTGTGTAGATGCTGCGAGACAGTTTGCCGAGTCTCGTGTAGGACTGGTTGATCGTTCTATAACTGCACTAGATCTTATGGCAGGTTCTGTAAACTGTTTAGAAAAATGGACTAATAATGCTAAGAAAACTGTCAAAGAAGAGGAAGTGGAAAAGATGATGCAGGATATTGGGGAAATGTGGTTTAGGCTAGTGCAAGGACTGGGGAAAGTATGCTTGGATCAGAGAGAGGAGGTTAGAAACCATGCGTTATTATCTTTGCAAAAGTGCTTGCTAGGAGCTGTTGGGACTCACCTGCCATGTGATTTGTGGTTGACATGTTTTGATCAAGTTATCTTCACTGTGCTCGAAGACCTGCTTGAAATTGCACAATCGCATTCTCAGAAAACCTACCCAAACATAGAAGGAACACTTGTTATTGCCTTGAAGCTTATGTCTGAAGTTTTCCTCAAGTTACTCCAAGAACTATCACAATTGGCGGCCTTCTGCGAACTATGGGAGGATATACTAAGCTGTATGAAAAAATGTGTGAATATGAAAATTAAAGGAAGAAGAACTGAAAAGCTTCAAGAGCTTGTGCCAGAGCTTCTGAAGAACACTTTGCTTGTTATGATATCTGGGGGCATACTAGTGCAGAGTAATAATGGTTTGGGTGAAAATACTTTGTGGGAACTGACATGGCTACACATAAAGAATATTTCTCCCTCATTGCAGTCTGAGGTGTTTCCTGAGGAAGATCTAGAACAGCATTAA 4296 0.3964 MQMQTGLNATKDQYEQCGAGYPNKTTVACMINAEISAVLAVMRRNVRWGVHYMSNDDQTEHFLVQSLKTLRRQIFSWQNQWHSINPTLYLQPFLDVIRSDETSAPITGVALSSVYKILTLDVIDQHTVNVGDTMHFVVDSVTSCRFEVTDPGSEEVALMKILQVLLACVKGKASVMLSNQHICIIVNTCFRIVHQAGTKGELLQRIARYTMHELVRSIFSHLQNIDNTECEFINGSATLKQETTGLSNDHALASRELENGSLNSAYDAQPLSKIIASSTAIANVVDENTAIASSGNETDPHELQIMIKPYGVPCMVEIFHFLCSLLNVSEHRGVNSRSNTMTFDEDVPLFALTLINSAVELGGPSFRRHPRLLSLIQDELFCNLMQFGLSMSPLVLSMVCSIVLNLYQHLRPELKLQLEVFFSCVILRLAQSKYGASYQQQEVVMEALVDFCRQKTFMIETYANYDCDISCSDVFEDIANLLSKNAFPVNNPLSSIHILALDGLIALMDGIAERIGSGSLSSEESPVNFEEYTPFWMEMCDNFDDPNDWVPFVRQRKCIKRRLMIGADHFNRDIKKGLEFLRGTHLLPNKPDPQSVACFLRYTAGLDKNLIGDFLGNHDEFCVQVLHEFSRTFDFHDMTLDTALRVFLETFRLPGESQKIHRVLESFSERYYEQSPDILANKDAALVLSYSMILLNTDHHNVQVRKKMTEEDFIRNNRHINGGNDLPREFLSGIYHSICKNEIRTTLEPSFGFPEMTPSRWISLMHKSNKTAPYIVSNSRSYLDYDMFVLLSGQTITAISVVFDDAENKEVYQTCIDGFLVVAKISAYYNLENALNDLVVCLCKFIAILDPLSVDESVLALGDDTKVRIATETVFTIANRYGDYIRTGWRNILDCILIFYKLGLIPTRLASDAADESRVTTEIGHGKSNSNSLLSSNIQHIIPKRSSGLISRFSQLLSLGSEEIQSIPTQEQLVALQRATQAIQKCQIDSIFTESKFLQAESLLNLERALINAGTQHPKGNRISEDEDPSVFCLELLVAITLNNRDRVVLIWKGVYEHLSNIIRSTVMPCALVEKAIFGLLRICHRLLPYKENITDELLRSLQLVLKLDALVADAYYEKITQEVSCLVKANASHIRSQSGWGTITALLSITSRHLESSEAGFDALLFIMSDGAHLLPANYILCVDAARQFAESRVGLVDRSITALDLMAGSVNCLEKWTNNAKKTVKEEEVEKMMQDIGEMWFRLVQGLGKVCLDQREEVRNHALLSLQKCLLGAVGTHLPCDLWLTCFDQVIFTVLEDLLEIAQSHSQKTYPNIEGTLVIALKLMSEVFLKLLQELSQLAAFCELWEDILSCMKKCVNMKIKGRRTEKLQELVPELLKNTLLVMISGGILVQSNNGLGENTLWELTWLHIKNISPSLQSEVFPEEDLEQH 1431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02202 1431 ProSiteProfiles SEC7 domain profile. 560 741 IPR000904 GO:0005085|GO:0032012
Spst1g02202 1431 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 313 474 IPR032691 -
Spst1g02202 1431 SMART sec7_5 556 743 IPR000904 GO:0005085|GO:0032012
Spst1g02202 1431 SUPERFAMILY Sec7 domain 557 745 IPR035999 GO:0005085|GO:0032012
Spst1g02202 1431 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 70 1426 - -
Spst1g02202 1431 Pfam Sec7 domain 560 743 IPR000904 GO:0005085|GO:0032012
Spst1g02202 1431 FunFam ARF guanine-nucleotide exchange factor GNOM 553 635 - -
Spst1g02202 1431 Gene3D - 553 635 - -
Spst1g02202 1431 FunFam ARF guanine-nucleotide exchange factor GNOM-like 635 753 - -
Spst1g02202 1431 CDD Sec7 560 743 IPR000904 GO:0005085|GO:0032012
Spst1g02202 1431 Gene3D - 636 751 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02202 Spst-Chr1 30431909 30436994 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02202 K18443 - gmx:100802024 2420.19