Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02199 ATGCCAAAGGAAAGAAGGGATAGGTCATTGTCACATGAAAGTTGCAGAGCATCACCTTACCCGAGCAGCTCTAGTCGTGTTGGAAGATCTGCTCTTAAAGAGTTGGAGGAAAACGTTAAAGAATGGGAAGAAGCTAGGTGTCCAGTGTGCATGGAACACCCTCACAATGCAGTTCTCCTCATATGTTCATCCCATGAGAAAGGATGCCGCCCTTACATGTGCAACACTAGCTATCGCCACTCAAACTGTCTTGATCAGTTCCGCAAGTCATTTGCTGACACCACATCAACCATTTCTCAAGTTGAAAGTCAAATTTCTAACACTGTCGATAGTATAATTGATGTGCCAGAAGACAGAAATGAGGAGGGGACTGTCCAAAGTGGAATTAATGTGCCGGAAGACATAAATGAGGTGACTGTGCAAAGTAGAATTGATGTGCCGGAAGACAGAAGTGAGGGTTTGGTTACAGTGCAAGCCTTATCCTGTGAGAATGAGACAAAGTCAAAGTTAGTATGCCCTCTATGTAGAGGGCAAATAAAAGAGTGGAAAGTAGTGGAGGCGGCTCGACATTTTATGAATGAGAAATCAAGGAGCTGTTCTTGTGAGACTTGCAACTTCAGTGGCACATACCCTGATCTTAGAAAGCATGCAAGACTTGAACATCCTCTTGAGCGCCCATCAGCAGTAGACCCAGAGCGTCAGCGTAACTGGAGGAGGTTGGAGCGGCAGAGGGATCTTGGCGACCTCCTTAGCACGCTTCAAACTTCATTTGGGGTTGATGATCCCATAGATGATGGTGGCCTGCTAGCTGTGTTTTTCCTCATTCTTCAACCTGCTTCTGTGTCCAGGGGTACCACACTCCAGATGCGAATAAGGAGACCTGCCACACTTTGGGGGGAAAATTATGATGGACAATCTGGATCTGATGATGCAAACGAATCTTCGGATGGAGGATCTGATAGTAGACCTCGTCGTGTCCGGAGACAACGGACGCCTCCGCCATGA 1005 0.4687 MPKERRDRSLSHESCRASPYPSSSSRVGRSALKELEENVKEWEEARCPVCMEHPHNAVLLICSSHEKGCRPYMCNTSYRHSNCLDQFRKSFADTTSTISQVESQISNTVDSIIDVPEDRNEEGTVQSGINVPEDINEVTVQSRIDVPEDRSEGLVTVQALSCENETKSKLVCPLCRGQIKEWKVVEAARHFMNEKSRSCSCETCNFSGTYPDLRKHARLEHPLERPSAVDPERQRNWRRLERQRDLGDLLSTLQTSFGVDDPIDDGGLLAVFFLILQPASVSRGTTLQMRIRRPATLWGENYDGQSGSDDANESSDGGSDSRPRRVRRQRTPPP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02199 334 MobiDBLite consensus disorder prediction 15 29 - -
Spst1g02199 334 PANTHER OS01G0612600 PROTEIN 1 265 - -
Spst1g02199 334 Pfam Protein of unknown function (DUF1644) 43 251 IPR012866 -
Spst1g02199 334 Coils Coil 25 45 - -
Spst1g02199 334 MobiDBLite consensus disorder prediction 1 29 - -
Spst1g02199 334 MobiDBLite consensus disorder prediction 298 334 - -
Spst1g02199 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 225 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02199 Spst-Chr1 30424504 30425508 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02199 - - gmx:100820179 577.4