Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02198 ATGGCTCTTGTTCTCAACGTGTCATTGTGTTCCACTTCTAAGCCCCTTCTCTCTCTCTCAAACTCCAATTCCAAACCTACTGTGCTTCATCTTCCTCTTCTGGGATTCAACGCAAAGCAAAGTCGCCAGCCATTTCAGAAACTCGCATTTTCATTGGGTGAGACCGTGTCGGGCGCCACCCTCGTTGCTCTCCTCTCTGCTTCTTTCGTCTTTGTTGATCCCGCACTTGCATTCAAGGGTGGAGGGCCATACGGGCAAGAAGTGACAAGGGGACAAGATCTCACTGGGAAGAACTTCAGTGGCCAGACGCTGATCAAACAAGACTTCAAAACGTCCATATTGAGACAAGCCAATTTTAAAGGTGCAAAGTTAATAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGATGCTGACCTTAGAAATGCAGATTTTTCTCTAGCAAATGTCACTAAGGCAAATTTAAGCAATGCTAACTTGGAAGGTGCACTTGCAACAGGAAATACATCTTTTAAGGGATCAAACATTACAGGCGCTGACTTCACGGATGTACCACTAAGAGAAGATCAACGTGAATATCTCTGCAAAGTTGCTGATGGAGTGAACCCAACAACTGGAAATGCTACGCGTGATACATTGTTCTGCAATTAG 663 0.4495 MALVLNVSLCSTSKPLLSLSNSNSKPTVLHLPLLGFNAKQSRQPFQKLAFSLGETVSGATLVALLSASFVFVDPALAFKGGGPYGQEVTRGQDLTGKNFSGQTLIKQDFKTSILRQANFKGAKLIGASFFDADLTGADLSDADLRNADFSLANVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLFCN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02198 220 Pfam Pentapeptide repeats (8 copies) 132 167 IPR001646 -
Spst1g02198 220 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 1 220 IPR044213 -
Spst1g02198 220 FunFam thylakoid lumenal 15 kDa protein 1, chloroplastic 77 220 - -
Spst1g02198 220 SUPERFAMILY Pentapeptide repeat-like 86 190 - -
Spst1g02198 220 Gene3D - 77 220 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02198 - - pvu:PHAVU_001G235600g 383.259