Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02163 ATGGTTTCATTCTCCCTATTCATCCTCTGTTCCTTAATCCTCCTCGTCCAACCTTCTTCCTCCACGCAGCCTCTCAATTTTGAACCCGATAACATCGAACTCCTCGGCGACGCCCACGTTGTCGCCGTCAACGACGCCCCCTCCCATGTGCACCTCACGCACCCCACCCCCTCCTCCTTCGGCCTCCTCCGCCGCCCCCACCCTCTATTCTTCGCCGGCAGCACCACCAACTTCTCCACAGAATTCTCCTTCTCCATCTCCGGCGATGGCAGCGGCCTCCTCCTCGTCCTCACCGCCGCTGGCGGCAACGGTTCGGATTCCGTTGCCGTTGAGTTTGATACGTCCAAGGATGACAATGTCGGCGACCCCAACTTGAACCACGTTGGCATCGACGTCGGAAGCCACATGTCCGTGGCTGTCGTGAATGTTTCCGATGTGAATCTTGTTCTCAATAGCGGGGAAAAGTTGAATGCTTGGGTTGATTATAATGGTGGTTATAAGGTGTTGGAAGTCAGGTTAAGCAAATGGGGTGATCAAAAGCCTTCTGATCCCATTGTTTCTCATGAGATTGATTTTTCCAAGTTATGGGGCGAGAATCCTGTGTTTGCCGGTATAAGTTCTTCCAATAGTGCCCTTTCGGTGCAGGTTGTTAGTATCTATTCGTGGAGGCTTAGTTTGAAGAAAGCTTCACATGGGTTGCACTCTCTATCTGCCGATCGGCATGATTTATCTGAGGACGAGCATAGGAGACTTTGTCCTTTGACGGTTCTTGCTGGGGTGATTTTTGGAACTGGGTGCGTTGCGTTGGTGACGTTTGTGGTGCTGTTTATGTGGGTGATTTTCTTCCAAAAGGGCCCAGAGGAGTCTCTTGCCAGAATCCCTGATCACACTTCGGATATCAAGTATGAAAGAATTGATGTGGCTGTTGACAAGAATCCGCACGATGATGAGAGTTAG 957 0.511 MVSFSLFILCSLILLVQPSSSTQPLNFEPDNIELLGDAHVVAVNDAPSHVHLTHPTPSSFGLLRRPHPLFFAGSTTNFSTEFSFSISGDGSGLLLVLTAAGGNGSDSVAVEFDTSKDDNVGDPNLNHVGIDVGSHMSVAVVNVSDVNLVLNSGEKLNAWVDYNGGYKVLEVRLSKWGDQKPSDPIVSHEIDFSKLWGENPVFAGISSSNSALSVQVVSIYSWRLSLKKASHGLHSLSADRHDLSEDEHRRLCPLTVLAGVIFGTGCVALVTFVVLFMWVIFFQKGPEESLARIPDHTSDIKYERIDVAVDKNPHDDES 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02163 318 Gene3D - 23 239 - -
Spst1g02163 318 CDD lectin_legume_LecRK_Arcelin_ConA 29 225 IPR001220 GO:0030246
Spst1g02163 318 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 7 308 - -
Spst1g02163 318 Pfam Legume lectin domain 27 230 IPR001220 GO:0030246
Spst1g02163 318 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 226 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02163 Spst-Chr1 29867270 29868226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02163 50 222 Receptor kinase-like Gene Family AT5G03140 34.409 2.05e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02163 - - vra:106757171 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02163 1 29867270 29868226 Spst1g02163 1 29867270 29868226 ECH