Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02156 ATGGAGTCTTCGAGCAAGCGACCAAATCCTAGATTAAATGATGATTGGGGAAAGAGGCGTGAAATTGGGCAACCCAAAATCAACTCGTCCTCTCTCTTGCTTTCACGCATTGCAATTCAGAGAAGATGCACTTCTTTTCTCTTCCCACCGAAAGAGATGCAGGAATCCTTGACCATTCATCTAAGCTTAGCTTTCACATGGCAAGAGTACCATGAGGCTCTTGAGAAATCCATTCTCTTCTTTGAGGGACAACGGTCGGGAAAATTGCCTTCCAACCAGCGACTAACATGGAGGGGAGATTCTGGATTATCCGATGGCTCTTCTTATCATGTGGACTTAGTTGGTGGTTATTATGATGCTGGAGATAACGTTAAGTTTGGGTTGCCAATGGCCTTTACCACTACATTGTTAGCATGGAGTGTGATTGAATTTGGAAGCTCCATGATGGACCAAATTGACAACGCTAGAGCTGCTATCCGCTGGAGCACAGATTACCTTCTCAAGGCTGCCACCACCACCCCTGACACATTATATGTCCAAACACTGATTGAGGATTATATATCTCGAGTATGA 573 0.4468 MESSSKRPNPRLNDDWGKRREIGQPKINSSSLLLSRIAIQRRCTSFLFPPKEMQESLTIHLSLAFTWQEYHEALEKSILFFEGQRSGKLPSNQRLTWRGDSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGSSMMDQIDNARAAIRWSTDYLLKAATTTPDTLYVQTLIEDYISRV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02156 190 Gene3D - 66 185 IPR012341 GO:0005975
Spst1g02156 190 Pfam Glycosyl hydrolase family 9 70 180 IPR001701 GO:0004553|GO:0005975
Spst1g02156 190 PANTHER ENDO-1,4-BETA-GLUCANASE 60 180 - -
Spst1g02156 190 MobiDBLite consensus disorder prediction 1 22 - -
Spst1g02156 190 SUPERFAMILY Six-hairpin glycosidases 68 181 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02156 Spst-Chr1 29823807 29826565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02156 58 181 Glycoside Hydrolase AT1G02800 66.935 2.25e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02156 - - gmx:732658 234.187