Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02142 ATGGCGTCATCGCGTCCCCCACCGTCGAAATCAGTGGATCTGGACCTCACCATCGTGGCGGCGAAGCACCTCAAGAACGTCAACTGGAAGAACGGGGATCTGAAGCCCTACGTCGTTTTTTGGGTGGACCCCGAGCGCCGTCTGGCCACCAAATCCGACGACTCCGGCAACACCTCCCCTGTCTGGAACGAGCGCTTCGCCCTCCCACTCCCTCTCCCTCTCCACGAATCCTTCCTCACCCTCGAGATCTTCCACTCCAAACCCTCCGACACTCCCAAACCCCTCGTCGCCACCCTCCGCCTCCCCCTCAAGGACCTCCACGACCTCCACGACTCCACGCGCCTCCGAAAGTTCCCCCTCTCCCGCCCCTCCGGCCGCCCCCACGGCAAGATCCACCTCAAACTGGGCCTTCTTGGCCGCCCCCAATTCCAATCCCTCGATTACCTCAACCCCAACCACAACCCTAACCCCAACCCCAATCCCAATCCCAACCCTAGTCATAACCCTAATTTCGTCTTCTACAGGGGATATTCTCATTCCCATTCCCCTTCTCCACCACCCTCCCCATACCCTTCGTACACCTCTTACCCCGATTCATATAATTCTTCTTACTATCCCGGTTACTATTCTGGTGCCGCTCCTCCTCCTCCTCCTCCTCCTCCTCCGAGACCCTTCTTAGACCGTTACGCTGGGCCCAGTGGGCCTTCCGCTCCGCTTGATTATTCAACCTGCTACGACCCCAAGCCCAAGCCTCCCAAAATGGGCCTCGGCACTGGCCTCGCTGTTGGCGCTGTTGCTGGAGCTCTCGGTGGGCTTGCTCTAGAAGAGGGGCTCAAATACGAAGAGGACAAAATCGCGGAGAGGGTCGAGAACGACGTCGCTGCTAGTGCTGCGCGCGACGATTACAGCGATTATCGAGTGGATTACTGA 930 0.5892 MASSRPPPSKSVDLDLTIVAAKHLKNVNWKNGDLKPYVVFWVDPERRLATKSDDSGNTSPVWNERFALPLPLPLHESFLTLEIFHSKPSDTPKPLVATLRLPLKDLHDLHDSTRLRKFPLSRPSGRPHGKIHLKLGLLGRPQFQSLDYLNPNHNPNPNPNPNPNPSHNPNFVFYRGYSHSHSPSPPPSPYPSYTSYPDSYNSSYYPGYYSGAAPPPPPPPPPRPFLDRYAGPSGPSAPLDYSTCYDPKPKPPKMGLGTGLAVGAVAGALGGLALEEGLKYEEDKIAERVENDVAASAARDDYSDYRVDY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02142 309 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Spst1g02142 309 MobiDBLite consensus disorder prediction 144 191 - -
Spst1g02142 309 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Spst1g02142 309 Gene3D C2 domain 3 138 IPR035892 -
Spst1g02142 309 MobiDBLite consensus disorder prediction 211 228 - -
Spst1g02142 309 SMART C2_3c 13 115 IPR000008 -
Spst1g02142 309 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 139 IPR035892 -
Spst1g02142 309 MobiDBLite consensus disorder prediction 211 246 - -
Spst1g02142 309 Pfam C2 domain 13 108 IPR000008 -
Spst1g02142 309 PANTHER INGRESSION PROTEIN FIC1 14 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02142 Spst-Chr1 29705472 29706401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02142 - - gmx:102666594 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02142 1 29705472 29706401 Spst1g02142 1 29705472 29706401 ECH