Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02118 ATGGGTTTTTCCTCAAAAGATGAGAAATCCAAGAGAATATTGAGGGGCTTGAAGACTGTGTTCTTCTTGATCGCTATGGTTATATCGCTTCTTCTTTTCTCTGCCCCGGTTCTCCTTGTTATTGCCGATGCACTTGTTCCTTCTGCTCTTCTCTCCACGATTTCCCCTTCTTCTTTCTCCTTGGAAAATCTTGCTTCCCATTTCCACAACTACGATTTTCGATACTCTCTCATTGATATTCCCCTCATCTCCATAATACGATCCTTCATCATCTTCTGTGTTTATAGTTTGTGCGACGGACCAAGGCTTTCGCATGGACCTTATTTGGGGATTACGACCATGTGTTCTGTTTTGTCTCTGATGTTTGTGTCGTTGAAGGCAGTTTACATCTTCAGTGTTTGGGGGATTGAACGAAGTGGATACGTTGGAGGTACCGAAATAGCTCTATTCGTATGCTCTTGTGCGTTGGCCGTGGGGCATGTTGTCGTGGCCTACAGAACAAGTTGCAGGGAAAGAAGAAAGCTTTTGGTCTACAAAATTGACATCGAAGCTATTTCAGCTTGCAAAAATGGGTATCCCAGGTATCCCAAGATTCTTCAGGAAGAACGAATCAAATGA 618 0.4337 MGFSSKDEKSKRILRGLKTVFFLIAMVISLLLFSAPVLLVIADALVPSALLSTISPSSFSLENLASHFHNYDFRYSLIDIPLISIIRSFIIFCVYSLCDGPRLSHGPYLGITTMCSVLSLMFVSLKAVYIFSVWGIERSGYVGGTEIALFVCSCALAVGHVVVAYRTSCRERRKLLVYKIDIEAISACKNGYPRYPKILQEERIK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02118 205 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 204 - -
Spst1g02118 205 Pfam Cholesterol-capturing domain 61 130 IPR019498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02118 Spst-Chr1 29340374 29342426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02118 8 198 Miscellaneous Gene Families AT1G80280 42.453 1.47e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02118 - - gmx:100811069 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02118 1 29340374 29342426 Spst1g02118 1 29340374 29342426 ECH
Spst1g02118 1 29340374 29342426 Spst1g02118 1 29340374 29342426 PCT