Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02117 ATGGCCTGGTTGTGGCGCGCAGGTGCCAAGTTCTCTCTTGTTGCCTCCACCGTCGGCGGCGGCGTCACGGCGGCGCTCATTGCTACCTCCGATGACCCCACAACGGCGCTCAGGCTTTGCACCACCGTCCCCCATCGACTCTTACGCGACGCCGTCACGGCCGCCAACATTGCTTTCGATTATGAATATTCACTGTGGGGACTCCCGGAAGGGAGTACTGAGAGGGAGAGAATGAAGCATGAAGTTCACCTCCGGTCAGCACAAAAACTTCAACACCTTTGCTTTAAGAACGGAGGGGTTTATATAAAGCTTGGGCAACATCTTGGGCAATTGGAATATTTAGTTCCTGAGGAATATGTTCAGACCATGAGGGAATCTATGCTAAATAAATGTCCAGTTTCTTCTTATGAGCAAGTGTGCAACGTATTCAAGAAAGAGCTTGGAGACACTCCAGATAAAATATTTTCCGAGTTTGATCCAGTCCCTATAGCAAGTGCTTCCCTTGCACAAGTTCATGTTGCTCGCATGCATGATGGCCAAAAAGTTGCTGTGAAGGTTCAGCATACTCACATGACTGATACTGCAGCTGCTGATCATGCCACTGTGGAATTGGTTGTAAACACATTGCACAGATTTTTTCCCAGTTTTGATTATAGGTGGTTGATTGATGAGATTAGTGAAAGTTTGCCTAAGGAATTAGATTTTTTAACTGAGGCAAAGAACAGTGAGAGGTGTTTAGATAACTTCCACAAGTTGTCTCCTCATATTGCAGATTATGTATATGCACCAAAAGTATATTGGAACCTGAGTACCTCGAAGCTGCTAACAATGGAATTCATGGATGGTGCTTATGTAAATGATGTAAAAACCATTCAGAAACTTGGGATCAACCTGCATGAACTTTCAACATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAACATGGGTTTGTGCATTGTGATCCACATGCTGCTAACTTATTGGTTCGCCCCTTGCCTTCCGGTAAAACTAGCATTTGGGGCAGGAGAAAACCCCAGTTGATCCTTTTAGACCATGGACTCTATAAAGAGCTTGATTTCCAAACAAGAACTAATTATGCTTCACTATGGAAGGGGTTGGTATTTGCTGATGCTAATGCAATCAAAGAATACAGTGCAAAGTTGGGAGCCGGGGAGGATTTATATGCACTCTTTGCTGGAGTTTTGACTATGAGGCCATGGAATAGGGTTGTTGACCCATCTATGGATCATTTAGTCATACAGGGAAATGAGAGTGAACGATTAGAACTACAGATGTATGCTTCTCAATATTTCCATCAAATCTCAGAGCTTCTAAGGAGATTACCGCGTGTAATTCTTCTAATGATGAAGACAAATGATTGTTTACGAGCGGTCAATAATTGTCTGTTACAGGGATCATCTTTGGAGACATTTTTTATCATTGGAAAGGTTTCTTCGGAGGCTGTCATTGAGGCAAAGATGTTGCAAAGCAAATCACTTTTAACTTGGTTAAATGTTAAACTGGATAAGATTTTGCTAGAAGTACGACTCTGGGGAATGCAAGTGGCCTTGTGGCTTTTACAACTAAGAAATGCTGTCTTGGTCTAA 1611 0.4283 MAWLWRAGAKFSLVASTVGGGVTAALIATSDDPTTALRLCTTVPHRLLRDAVTAANIAFDYEYSLWGLPEGSTERERMKHEVHLRSAQKLQHLCFKNGGVYIKLGQHLGQLEYLVPEEYVQTMRESMLNKCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASASLAQVHVARMHDGQKVAVKVQHTHMTDTAAADHATVELVVNTLHRFFPSFDYRWLIDEISESLPKELDFLTEAKNSERCLDNFHKLSPHIADYVYAPKVYWNLSTSKLLTMEFMDGAYVNDVKTIQKLGINLHELSTLVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSGKTSIWGRRKPQLILLDHGLYKELDFQTRTNYASLWKGLVFADANAIKEYSAKLGAGEDLYALFAGVLTMRPWNRVVDPSMDHLVIQGNESERLELQMYASQYFHQISELLRRLPRVILLMMKTNDCLRAVNNCLLQGSSLETFFIIGKVSSEAVIEAKMLQSKSLLTWLNVKLDKILLEVRLWGMQVALWLLQLRNAVLV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02117 536 CDD ADCK1-like 126 390 IPR045307 -
Spst1g02117 536 PANTHER ABC1 FAMILY PROTEIN 28 488 - -
Spst1g02117 536 SUPERFAMILY Protein kinase-like (PK-like) 132 331 IPR011009 -
Spst1g02117 536 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02117 Spst-Chr1 29325173 29330591 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02117 K08869 - gmx:100796182 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02117 1 29325173 29330591 Spst1g02117 1 29325173 29330591 ECH