LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g02083	ATGGTGAACGTGGACGAACTCTTATCTTCCTTGATCTCAGACATTCATTCCTATACGGACAAAGACCCTCTTCTTCCATGGCTTCGCGCGATCCGAAAGATAAAGGATTCTCTTCCTCCCAAAACCCTGATGGAAAAACTACCCGCGTTCTTGCAGAAATGCGCCCACACCTTCGAGCTCGATCGACGTTACAGAAACGACACGCGCTACCTTCGAGTGTGGCTCCATCTGATGGATTTTGTGAATGATCCAAAAACACTTTTGAGAACCATGGAGGTTAATGACATTGGGACAAAACGTTGTGAATTCTACCAAGCGTATGCTCTTTACTACGAAAAGAGCAGGAAGTACGATGAAGCAGAGAGAATGTACCATCTGGGAGTGAAGAACCTTGCAGAGCCTCTAGATAAATTGCATAAATCATATGAACAATTTCTTCAACGCATGCAGCAGCGAAAAAATAGTAAGAAAATCCAGCATCAGGAAGCAAAAGCTGCCAGGAGGCCTTTGTCTTCGAAGAGTTCTCTTGACAACAAGACTGAGGGAACCAAAAGCAATGGAGCATGTCGTGTTGAGGGTGTGCGAAAGGATCTCCAAATTCAGAATTATGCAGCTCAAGATGTAGCTGATGATAAACACTTACAGACTAATAAGGAGTGCAAGAAATTTGGTGGTGATGATACAGTTGTAGTAAAATTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGGTTGGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATCAACAGCATGTTCCGGGAGCCATTGGAGACTGTTCCATTAGGCAGGAAATCACATAAAAACCATTCAAAAGAAAATCACAGAACAAAGAACGAGTTTGAGATTTTTGTTGAAAACTTAGATCATGGAATCAAACCATCCGGTTCTTTATCACTTCAGAAAAGGACTGAAGCTAGCCAACCTCACCAAGAACCGCTCCAGATATACATTGATGATGAAGAAAATTCTGAGAGCAATAATGCGAATATATCTGAAGGTGGTTCTATTTCATCGGCTTCACAACCAGATGACTTTGTTTTTCTCCGCCCCAAGGACATCCCTTCTGAAAAATCTAGTGACATGGATGCTGACAGTTCTCGTAATTCAAAATTCAGAGAGGATACAGTTGTTTGCAGATTTGTTGGTTCCACCATTTTGGATGAGCCAGAGGTGGAAAATGTTTGCCACCACGGTTTAGTAGATCCCACCATCAACTTGAAGGAAGCTATGGATGATATAAATAACATGTTTGGGAAGCCAATCGATTTTGTTAGGAAAAGAAGAACCATCAAGCAGGAGAAAGCACCCCAGAGCAGTAGGGGAAATGACTTTGGTGGGTTTTCAATCCTTGCTGATGATCACCACGTGGAACAACCAGTTCGACCACCACCAAAATTGCCAGGAAAGTCCAAGGAATCTGATTTGTTTGAGCCAACTCTCCTCACGAAGGAAGCCATGGACGATATAAACAAAATGTTTAACATGCCCCTGGATTTTTAG	1554	0.4266	MVNVDELLSSLISDIHSYTDKDPLLPWLRAIRKIKDSLPPKTLMEKLPAFLQKCAHTFELDRRYRNDTRYLRVWLHLMDFVNDPKTLLRTMEVNDIGTKRCEFYQAYALYYEKSRKYDEAERMYHLGVKNLAEPLDKLHKSYEQFLQRMQQRKNSKKIQHQEAKAARRPLSSKSSLDNKTEGTKSNGACRVEGVRKDLQIQNYAAQDVADDKHLQTNKECKKFGGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLGRKSHKNHSKENHRTKNEFEIFVENLDHGIKPSGSLSLQKRTEASQPHQEPLQIYIDDEENSESNNANISEGGSISSASQPDDFVFLRPKDIPSEKSSDMDADSSRNSKFREDTVVCRFVGSTILDEPEVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRKRRTIKQEKAPQSSRGNDFGGFSILADDHHVEQPVRPPPKLPGKSKESDLFEPTLLTKEAMDDINKMFNMPLDF	517

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g02083	517	FunFam	Mad3/BUB1 homology region 1	10	168	-	-
	Spst1g02083	517	PANTHER	MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1	8	517	IPR015661	GO:0007094
	Spst1g02083	517	MobiDBLite	consensus disorder prediction	152	188	-	-
	Spst1g02083	517	Gene3D	-	9	167	-	-
	Spst1g02083	517	MobiDBLite	consensus disorder prediction	367	386	-	-
	Spst1g02083	517	MobiDBLite	consensus disorder prediction	342	360	-	-
	Spst1g02083	517	MobiDBLite	consensus disorder prediction	342	361	-	-
	Spst1g02083	517	ProSiteProfiles	BUB1 N-terminal domain profile.	11	175	IPR013212	-
	Spst1g02083	517	Pfam	Mad3/BUB1 homology region 1	11	128	IPR013212	-
	Spst1g02083	517	Coils	Coil	146	166	-	-
	Spst1g02083	517	MobiDBLite	consensus disorder prediction	171	185	-	-
	Spst1g02083	517	SMART	mad3_bub1_i	4	128	IPR013212	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g02083	-		-	gmx:100806627	860.907

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst1g02083	1	29050849	29053216	Spst1g02083	1	29050849	29053216	ECH