Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02056 ATGAAGCCACACGCTCAGGCTTCTTCTTTCCTCACTCCACCCCCGCACGTGCCTTTCTTTCGCGCCACCACTTCCGCTCGTGCCGCACCGGCGGAGTCTCTTCATGCTGCCGCCGCCAACGAATTCCGCCGCGTCTGGGCAGCGAAACGCCGCCGGATCCACCTGTCCGTCCGCCACTCAGCTTGCGTCGCCGCGGCTTCCAATGGCTCCGACGGCGACGAGAGTCTTCCTCGGAGCAGCCGGCGCGGCGTGCTGATGGCGCCGTTCCTGGCCGCCGGCGCGTCGATTCTGCTCTCTACGGCTGCGAGGGCGGAGGAGAAGGCAGTGGAATCGGCTCCGGCGGCGCCGAAGATTGAGGAGGTGAAGAAGAAGGAGGAGGAGGAAGTGATAACGTCGAGGATTTACGACACGGCGGTGATAGGGGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAGGTGTGGGAGAAGTTGATGAATGCGCGAGTGGTATATTTAGGGGAAGCGGAACAGGTTCCGGTTCGAGACGATAGGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAGGCGCTGTTTGGAGAAGGAAAAGAAATTGTCTCTTGCGCTTGAAGCTTTTCCTTCTAATCTTCAGGAACCGCTCAATCAGTATATGGATAAGAAGATAGATGGAGATACCTTGAAGTCTTATACGTTACATTGGCCCCCTCAAAGATGGCAGGAGTATGAACCTATTCTGAGCTACTGTCGTGAAAATGGAATCCGTCTTGTCGCTTGTGGTACTCCACTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGCTGAACGTAAACTATATGCTCCTCCAGCTGGTTCAGGCTTTGTATCAGGCTTTACTTCTATTTCACGTAGATCTTCAGTTGATAGTACTTCAAATCTGTCTATTCCTTTTGGTCCAAGCTCATACCTTTCTGCACAAGCTAAAGTTGTTGAGGAGTATTCTATGTCCCAGGTTATCTTACAAAATGTGCTTGATGGAGGGGCCACTGGTATGTTAATAGTAGTGACTGGTGCAAACCATGTTATGTATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAAATACAGAAGAAAAACCAAGTAGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCCGTGGCTGATTTTTTATGGTATTCTGCTGCCAGACCCTGTACTAGAAATTGCTTTGACCGGGCCGAAATTGCTCGGGTTATGAATGCTGCTGGTCGGAGACGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTAGGTTTAGTATCTCCAGAGGTGTTGCAAAACTTCTTTGATCTAGAGCAGCATCCTCTGATTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATAGAAGAAGCTATATCAATAACAACTACATTGTTGGCACAATATGAAAAGCGGAAAGAAAACTTTTTCCAAGAGCTTGACTATGTTATTACAGACACTGTCAGAGGATCAGTAGTTGATTTTTTTACAGTGTGGCTTCCTGCACCAACTTTATCATTCCTTTCATATGCTGATGAGATGAAAGCACCTGACAACATTGGTTCTCTAATGGGACTTCTTGGTTCCATCCCGGACAATGCATTTCAAAAGAATCCAGCAGGGACAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGGCTAAAACTTGCTAGTGTTGGATTTATTTCAAGCATTGGAGCCGTGGCTTCTTCAAATTCTCTATATGGTATTCGTAAAATCCTGAATCCAGCGGTTGTAACTGAACAACGGATTATAAGGTCACCAATACTCAAAACGGCAGTTGTATATGCATGTTTTCTTGGAATTTCTGCAAATCTCCGTTATCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCTGAACAGTTTGCTTCCCAAACATTATTTGTAAATATGCTTTCTTTTGTAGCACGGACTGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTAGCGCGCTTTACTGGCCTGCAAGTTAGAAAGACAGAGTCACCACCATCAGATTCTCCAAATCATGCTGCAATTTTATGCAACGAAACAGAAGAAGCCACCATTGATGAGATAGAAAAATAA 2223 0.4633 MKPHAQASSFLTPPPHVPFFRATTSARAAPAESLHAAAANEFRRVWAAKRRRIHLSVRHSACVAAASNGSDGDESLPRSSRRGVLMAPFLAAGASILLSTAARAEEKAVESAPAAPKIEEVKKKEEEEVITSRIYDTAVIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLHRRCLEKEKKLSLALEAFPSNLQEPLNQYMDKKIDGDTLKSYTLHWPPQRWQEYEPILSYCRENGIRLVACGTPLKILRTVQAEGIRGLTKAERKLYAPPAGSGFVSGFTSISRRSSVDSTSNLSIPFGPSSYLSAQAKVVEEYSMSQVILQNVLDGGATGMLIVVTGANHVMYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCTRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQHPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMKAPDNIGSLMGLLGSIPDNAFQKNPAGTNWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYGIRKILNPAVVTEQRIIRSPILKTAVVYACFLGISANLRYQIIAGIVEHRISEQFASQTLFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESPPSDSPNHAAILCNETEEATIDEIEK 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02056 740 Pfam Protein RETICULATA-related 479 663 IPR021825 -
Spst1g02056 740 SUPERFAMILY EreA/ChaN-like 152 408 - -
Spst1g02056 740 Gene3D - 125 411 - -
Spst1g02056 740 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 40 738 - -
Spst1g02056 740 Pfam Haem-binding uptake, Tiki superfamily, ChaN 153 372 IPR007314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02056 Spst-Chr1 28818918 28824276 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02056 - - gmx:100810366 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02056 1 28818918 28824276 Spst1g02056 1 28818918 28824276 ECH