Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02055 ATGTCAACCTCGTCATCATCGACCTCTTCCCAAAGCCTCAAAATTGGCATAGTTGGATTCGGCACCTTTGGCCAATTTCTGGCCAAGACAATGTTAAAACAAGGCCACTCTCTCGCTGCAACTTCTCGATCCGATTACTCCGACCTCTGCCTTCAAATGGGCATCCATTTTTACAGGGATGTTAGCGCATTCCTTGCCGCTGACATAGATGTCATAGTGTTGTGCACATCGATATTATCGCTATCAGAGGTTGTCGGGTCAATGCCAATAGCTTCCCTGAAGCGCCCAACACTATTTGTTGATGTTCTTTCAGTCAAAGAGCACCCGAGAGACCTTCTGCTACGAGAGTTGCCAGAGCACTCTGACATTCTCTGCACTCACCCTATGTTTGGACCTGTCACTGGCAAGAATGGATGGAGAGGTCTTACTTTCATGTATGACAAAGTTCGGATAAGAAATGAAGCTATCTGCTCTAGTTTCATCCAAATTTTTGCAAGTGAGGGTTGCAAGATGGTACAAATGACTTGCGAGGAACATGACAAAGCAGCTGCGAAGAGCCAATTTATAACACACACAATTGGCAGAACATTGGGAGAAATGAATATTAAATCCACACCTATTGACACTAAGGGCTTTGAGGAACTTGTTAAATTGAAGGAGACGATGGTGGGAAATAGTTTTGATTTGTTCAGCGGATTATACGTGTATAACAGATTCGCCAGGCAAGAGCTGGAAAACCTTGAACATGCCTTGCAAAAAGTCAAAGAAATGCTGGTTGAAAGGAGGAATCAGGAGAAGGGTGAAGAGAAGAACTGA 816 0.4412 MSTSSSSTSSQSLKIGIVGFGTFGQFLAKTMLKQGHSLAATSRSDYSDLCLQMGIHFYRDVSAFLAADIDVIVLCTSILSLSEVVGSMPIASLKRPTLFVDVLSVKEHPRDLLLRELPEHSDILCTHPMFGPVTGKNGWRGLTFMYDKVRIRNEAICSSFIQIFASEGCKMVQMTCEEHDKAAAKSQFITHTIGRTLGEMNIKSTPIDTKGFEELVKLKETMVGNSFDLFSGLYVYNRFARQELENLEHALQKVKEMLVERRNQEKGEEKN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02055 271 Pfam Prephenate dehydrogenase, nucleotide-binding domain 48 135 IPR046826 GO:0070403
Spst1g02055 271 Coils Coil 237 264 - -
Spst1g02055 271 Gene3D - 1 180 - -
Spst1g02055 271 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 13 271 IPR003099 GO:0004665|GO:0006571|GO:0008977
Spst1g02055 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 174 IPR036291 -
Spst1g02055 271 PANTHER AROGENATE DEHYDROGENASE-RELATED 4 264 IPR045011 GO:0006571|GO:0033730
Spst1g02055 271 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 175 260 IPR008927 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02055 K15227 - gmx:100787362 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02055 1 28816243 28818056 Spst1g02055 1 28816243 28818056 ECH