LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g02032	ATGCCAAGTGTTGTAGCTGTGTTGTTATGGCATGTCATTGCCTTGCTTCTTGTGGCAAATTTTGGGTATGCTTGGAGCTCTGATGCCACAAAACACAGACCAGAGGTGATTTATGCTCACAATGGAGCTGTTGCCACTGATGACCGTAGATGCTCAAGGATTGGGAAGGATGTTCTCAGAGAAGGAGGGCATGCTGTGGATGCTGCAGTGGCTGCTGCCCTTTGTTTGGGAGTTGTGAGTCCTGCCTCAAGTGGCCTTGGTGGTGGAGCCTTCATGCTTCTCAGGCAGGCCAATGGGGTGGCCAAGGCCTTTGACATGAGAGAAACTGCTCCTGCTCTTGCCTCCAAGGATATGTATGGTGGAAATACTACTTTGAAGGCCAAAGGTGGCCTCTCTGTAGCAGTTCCTGGAGAACTTGCTGGCCTTCACGAGGCGTGGAAACAATATGGGAAACTTCCATGGAAAAGACTTGTAAATCCAGCTGAGAATCTGGCACGTTCTGGGTTTAAGATATCAGCATACCTGCACATGCAGATGGAATCGACAGAGTCAGATATATTGCAAGACAAGGGTCTTCGTAGCATTTTTGCACCACAAGGAAAACTCTTGAATATAGGTGACACATGCTACAATACGAAACTAGCTGATACTCTGAGAGCAATATCTGAGTCTGGTCCAAAAGTATTTTATGATGGATTGATTGGTCAGAATTTAGTTAAGGATGTTCAGAATGCTGGAGGGATATTGAGTACGGAAGACCTCAAAAATTACACTATTAAACAGAAGAAACCCTTATCTACAGATGTTCTGGGACTAAATCTCCTTGCCATGCCTCCTCCCTCTGGTGGGCCTCCAATGATACTTCTGCTGAACATCCTGGATCAATATAAACTTCCTTCTGGCATTTCTGGTGCCCTCGGGTACCATCGAGAAATTGAAGCTTTGAAGCATGTATTTGCCGTGAGAATGAATCTTGGTGATCCTGATTTTGTAAATATAACCGAGGTTATTTCTGATATGCTTTCTCGTAGGTTTGCTAAAGAGTTGAAAAATGACATCAATGATAACAAGACCTTTGGCCCCAGTCATTACGGTGGCAGGTGGAATCAAATTCATGATCATGGTACAAGTCATTTATGTGTAATAGATGATGAGAGGAATGCCATTTCCATGACAACCACTGTAAATGCATATTTTGGTTCAAAGATCCTTTCACCAAGTACAGGAATAGTACTGAACAATGAGATGGATGATTTTTCCATGCCTAGAAATGTTTCCAATGATGTACCACCGCCAGCTCCTGCGAATTTCATCATGCCAGGAAAGCGGCCTCTATCATCCATGTCACCAACTATAGCCCTCAAGGATGGGAAGCTAAAAGCTGTAGTAGGTGCAAGTGGCGGTGTTTACATCATTGGTGGAACTTCAGAGGTTCTTTTGAATCACTTCGCTAAAGGACTGGATCCTTTTTCTTCTGTAACGGCTACAAGGGTCTATCATCAGCTAATTCCTAACGTGGTTAACTATGAGAATTGGACAACTGTGACCGGTGACCACTTTGAACTTCCTGCTGATATCAGGGAAGTCCTTAGAAGAAAGGGTCATGTCCTAAAGGGCATCGCGGGTGGGACAATTTGTCAATTTATTGTTGTAGATCATTTTTCGTCTAGAAAACATAAAGGGATTGGAAATGGAAGGCTTGTGGCAGTGAGTGATCCAAGAAAGGGTGGTCTTCCTGCAGGCTTTTAA	1749	0.4408	MPSVVAVLLWHVIALLLVANFGYAWSSDATKHRPEVIYAHNGAVATDDRRCSRIGKDVLREGGHAVDAAVAAALCLGVVSPASSGLGGGAFMLLRQANGVAKAFDMRETAPALASKDMYGGNTTLKAKGGLSVAVPGELAGLHEAWKQYGKLPWKRLVNPAENLARSGFKISAYLHMQMESTESDILQDKGLRSIFAPQGKLLNIGDTCYNTKLADTLRAISESGPKVFYDGLIGQNLVKDVQNAGGILSTEDLKNYTIKQKKPLSTDVLGLNLLAMPPPSGGPPMILLLNILDQYKLPSGISGALGYHREIEALKHVFAVRMNLGDPDFVNITEVISDMLSRRFAKELKNDINDNKTFGPSHYGGRWNQIHDHGTSHLCVIDDERNAISMTTTVNAYFGSKILSPSTGIVLNNEMDDFSMPRNVSNDVPPPAPANFIMPGKRPLSSMSPTIALKDGKLKAVVGASGGVYIIGGTSEVLLNHFAKGLDPFSSVTATRVYHQLIPNVVNYENWTTVTGDHFELPADIREVLRRKGHVLKGIAGGTICQFIVVDHFSSRKHKGIGNGRLVAVSDPRKGGLPAGF	582

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g02032	582	PANTHER	GAMMA GLUTAMYL TRANSPEPTIDASE	27	582	IPR000101	GO:0006751\|GO:0036374
	Spst1g02032	582	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	34	582	IPR029055	-
	Spst1g02032	582	NCBIfam	gamma-glutamyltransferase	44	515	IPR000101	GO:0006751\|GO:0036374
	Spst1g02032	582	Gene3D	-	371	582	IPR043137	-
	Spst1g02032	582	Pfam	Gamma-glutamyltranspeptidase	57	577	-	-
	Spst1g02032	582	Gene3D	-	264	368	IPR043138	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	248	264	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	64	89	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	277	296	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	400	418	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	132	150	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	376	394	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	440	455	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	464	481	-	-
	Spst1g02032	582	PRINTS	Gamma-glutamyltranspeptidase signature	150	169	-	-
	Spst1g02032	582	FunFam	Gamma-glutamyltransferase 5 isoform 1	264	368	-	-
	Spst1g02032	582	FunFam	Glutathione hydrolase 1	371	582	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g02032	Spst-Chr1	28574110	28577883	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g02032	13	582	Miscellaneous Gene Families	AT4G39640	64.223	0.0	732

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g02032	K18592		-	gmx:100797040	984.556