Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02016 ATGGACTCGGAATCTGCAAACTCCGATTCTCAACCACAGCCTCTCTCGAGCCAAAACGTGGACGCGTGCCACGAGATGAGTTCCCTTGAAGACCTCGCGAACCGCGGGGCGTGGCGTTCAATAATCGACAAGGTATCACGCGCCCGCGCGCTCTCTCTCCTCCATAAGCCCCACGACCACCTCACCTACCTCGCCTTCAACGCCCTCGCCTTCACAAAACTGCGTCGTTTCAACGAAGCCTCCGCGGAACTCGATTCCCTCGAAGACCTCGATAGTTCGCACTACCGCTACGAAACCTACCCGAAAATTTACCCTAACCGGGTCGGATCAATGGTCCCTTTTTCCCTCCGTTGGCTCAGCGCCCTAATTCCAATCAAATTAGGGCAACGTCAGCAGGGCATGGATCGCTTCTACACTCTCCTTGATTTCGTGCGCGGGAAGATTAAGGAAAAAGGGGAAAACAATAACCTTGGTGTCTCCCTTAATCTGTGGCGAAAACGAGAGGTTTTTGTCGTGAATTGCATCATAGGACACCATTTGAGTCAGAAAGAGTTCGGCGTGTGTTTAAGTTTGATGAAGGAGCTTCTTTCTCGAGATGATGGTTCGGACCCTTTGTTGGTTTCACAACTTGGCTACATGCAGTTGCAGATTGGGGACTTGGAGGGTGCGAAAGTTTCTTTTTTGAAGGTGGAGAGTGAGGGAAAGAATAATGGGTCGTTGAGCGAGGTTGAGTTTAAGAACCTTGTGAATAGGAACAAAGCGTTGGTGTATTTGGTTGGTAAGGATTATGTGTCGGCGGTGAGGGAGTACGAGGAGTGCATTGAGAGGGACAATGCTGATGTTGTGGCCGTGAATAACAAGGCTCTGTGCTTGATGTATCTTAGGGACTTGTCGGATTCTATTAAGGTGTTGGAGAGTGCGCTTGAGAGAGTTCCCACTGTGGCTCTCAATGAAACGCTTGTTGTCAATTTGTGTAGTATGTATGAATTGGCATATGTTAATCACTCTGATATTAAGAGAACGCTTAGTAGTTGGATTGCTCGTGTTGCACCTGACGATTTTGATGCATCTTGTACCCGTACATGA 1086 0.488 MDSESANSDSQPQPLSSQNVDACHEMSSLEDLANRGAWRSIIDKVSRARALSLLHKPHDHLTYLAFNALAFTKLRRFNEASAELDSLEDLDSSHYRYETYPKIYPNRVGSMVPFSLRWLSALIPIKLGQRQQGMDRFYTLLDFVRGKIKEKGENNNLGVSLNLWRKREVFVVNCIIGHHLSQKEFGVCLSLMKELLSRDDGSDPLLVSQLGYMQLQIGDLEGAKVSFLKVESEGKNNGSLSEVEFKNLVNRNKALVYLVGKDYVSAVREYEECIERDNADVVAVNNKALCLMYLRDLSDSIKVLESALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDASCTRT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02016 361 MobiDBLite consensus disorder prediction 1 21 - -
Spst1g02016 361 FunFam Trafficking protein particle complex subunit 12 171 343 - -
Spst1g02016 361 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 8 359 - -
Spst1g02016 361 Gene3D Tetratricopeptide repeat domain 171 342 IPR011990 GO:0005515
Spst1g02016 361 SUPERFAMILY TPR-like 199 316 IPR011990 GO:0005515
Spst1g02016 361 SMART tpr_5 281 314 IPR019734 GO:0005515
Spst1g02016 361 SMART tpr_5 204 237 IPR019734 GO:0005515
Spst1g02016 361 SMART tpr_5 247 280 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02016 K20309 - gmx:100779691 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02016 1 28406325 28407410 Spst1g02016 1 28406325 28407410 ECH