Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02012 ATGCTGCTTGGAAAGCGTCCTCGCCCACCGATTATGAAAAGAACTACCAGCATGAGTGGTGGCATGGCCGTCGAATCGCCAACAACCAACGAGGAACTCGTGTCTGATAACACTCACCATGATCATGAGCCTAACATCAAACCCGATCCACTTTTTGTTGCCATGGGAACACATAATGAATTGGTGCCTGACCTCACAAAAAATGTTTTTGAGGCCAAAGGGTCATCGTATGAAGAATATGGGGAACGTTTGATGGGTATGGGCATGGTCATACCCCTTTCTCCGACAACCTCAAATAACCCTCGTCTCAGTCACAACCATACAACAAACACTAACATAAACACTTCTCACTTTCTTCGCACTTGTGGCCTCTGCAAGTGTCGCTTGGCACCTGGTCGAGACATCTATATGTATAGGGGGGATACGGCATTTTGCAGTTTGGAGTGTAGGGAGAAGCAGATGAAGCAAGATCAGCGAAAGGAAAAGTGTAAGGCAGGGTCTAACAAGGAGCACCACCGTGCATCACCACCTGGCAAGGCTTCTACCAAAAGCGAAACGGCTGCGTGTAATTGA 573 0.4782 MLLGKRPRPPIMKRTTSMSGGMAVESPTTNEELVSDNTHHDHEPNIKPDPLFVAMGTHNELVPDLTKNVFEAKGSSYEEYGERLMGMGMVIPLSPTTSNNPRLSHNHTTNTNINTSHFLRTCGLCKCRLAPGRDIYMYRGDTAFCSLECREKQMKQDQRKEKCKAGSNKEHHRASPPGKASTKSETAACN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02012 190 ProSiteProfiles Zinc finger FLZ-type profile. 117 161 IPR007650 -
Spst1g02012 190 MobiDBLite consensus disorder prediction 19 33 - -
Spst1g02012 190 PANTHER FCS-LIKE ZINC FINGER 5 1 182 - -
Spst1g02012 190 MobiDBLite consensus disorder prediction 156 178 - -
Spst1g02012 190 MobiDBLite consensus disorder prediction 1 44 - -
Spst1g02012 190 MobiDBLite consensus disorder prediction 156 190 - -
Spst1g02012 190 Pfam zinc-finger of the FCS-type, C2-C2 112 160 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02012 Spst-Chr1 28355762 28356737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02012 - - pvu:PHAVU_001G250900g 275.789