Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02002 ATGGAGCTGATACAGTGTCTTCGTGACTTGCTCCTTCTCCACCTTCATCTCAGTCCCATGGCAACCCCAACGCGCCTCCTCCCTCTCCTCGTCTCTCTACTCTCGCTATGCTTCGTCTCAACCGTTAGATCGGACGATTGTGTTTACACGCTTTATATTCGGACGGGCTCCATCATCAAGGGAGGAACCGATTCAATAATTGGGCTCAAGCTCTACGACGCGCTCGGCTACGGTTTATACATCAAAAACCTCGAGGCCTGGGGCGGGTTAATGGATCCGGGTCACAACTACTTCGAGAGGGGCAACCTCGACATCTTCAGCGGTAGAGGCCCTTGCTTGGACCGGCCCGTTTGCGCCATCAATCTAACTTCGGACGGCTCGGGTCCCCACCACGGCTGGTACGTTAACTACGTGGAGGTCAATTCCGCTGGGGTCCACGCGCCATGCTCGCAGCTGCAGTTCACGGTGGAGCAGTGGCTCGCAACCGACACGTCGCCGTATGAGCTCTGGGCCGCACGCAACTACTGTCAAAAGCCCCTGGGCCAGGCCCGTCCTGAAACCCAGATCACCAACGTTATCAGCTCTCGGGATAGGCCTAGGTCCGGTTTCTCTGTTTCAGCCTCACACGTTGGCGAGTAG 639 0.5696 MELIQCLRDLLLLHLHLSPMATPTRLLPLLVSLLSLCFVSTVRSDDCVYTLYIRTGSIIKGGTDSIIGLKLYDALGYGLYIKNLEAWGGLMDPGHNYFERGNLDIFSGRGPCLDRPVCAINLTSDGSGPHHGWYVNYVEVNSAGVHAPCSQLQFTVEQWLATDTSPYELWAARNYCQKPLGQARPETQITNVISSRDRPRSGFSVSASHVGE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02002 212 CDD PLAT_plant_stress 47 174 - -
Spst1g02002 212 ProSiteProfiles PLAT domain profile. 47 174 IPR001024 GO:0005515
Spst1g02002 212 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 48 165 IPR036392 GO:0005515
Spst1g02002 212 Gene3D PLAT/LH2 domain 48 168 - -
Spst1g02002 212 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 44 179 - -
Spst1g02002 212 Pfam PLAT/LH2 domain 49 167 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02002 Spst-Chr1 28291304 28292037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02002 - - pvu:PHAVU_001G251400g 323.168