Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02000 ATGGATTCGCCCAACAGTGGCAGTATGCAGTCCTCCAGCACCGCCGGTGAAGAAGATTACGATTCACGCGCCGACCCTTCATCATCATCAATCTCTGCCTTCCTCAACAACAACCCCGTTCCTCCGCCCCAACCAACGACGTTAACAACAACCCACGTTACTCCCTTCCAAACCCACGTGTTCGACCCCTTATCCAATTACTTGGATCCGACACAAAGATCGCAGTCACACCCCAACACAAACCAAATCCTTAACCTCGACATGGTGTGGAACACGGTTGCCAGATCCGAACCCGATCTCGGTGGTTTGATACCTTGTTCCTCTTCACCTTCCCCACAAAACAGCAACAACCAAGGTTTCCTGTTAACTCAACTGGGTGCAGGTCAAAGTCAAACACGCGGAGGAGGACTTGCTAACGTAGCTGTTTCTGCTTTTCCCACCACTCTCGCTCCGGAAAGTGCTTCTCCACGAGGAGGATTTGAACAAAACAGTACCAGCACCAACACCAACGTGGTTCGAAACCCGAAGAAGAGGTCGAGAGCTTCTAGGCGTGCACCTACCACTGTGCTCACTACGGATACCACAAATTTCCGAGCCATGGTTCAGGAATTCACTGGCATCCCAGCACCTCCTTTCACTTCCTCACCCTTCCCGAGAACCAGGTTGGATCTCTTTGCTTCTTCTAATGCATCTTCCTCAGCGTTATTAAGATCCGCTTCCGCTCATTTAGAACAACCTCCGTCGCAAACACAAACACCCTCTTATCTTCTTCGCCCCTTTGCACACAAAGTCCAAGCTCAACCCTCTTCAGTCCCACACAACACTTTTCCCCCCATGTTGAACACCTTGGCTTCTAACAACAATTCAGGTTCCAATTCGACCTCCATTCACTATCAGCAGCACCCTCTAAACATGCACAACCCAATTCTCAGCCTCCAATCCATTCTCGGGAACAACAATTCTTCTGTCCTTGTTGGTTCTAAAACACAACAGCAGCACTCCTTGGAAATCACGCCCGGTGCTGTGGACTCGCACCTCAAGATGGGTGGTTTGGAAGAACTGGGATTGAGCCATGCGCACGTTGGTGGTCATCATCATCATCATCATCATCATCAAAACATGAACTTGGTTTCGTCTTCATCGGATGGAGCATTGTCGAGGGTCAACAGCAACCTAAACATAAACAACAACATGCGTGGTCCTTCTTCAGCAGACTGGGCCCAGGCCCAAAGAATTGGCGGCACCAATGATGGAGGGGTTTTGAGGTCTCTGAGTGGAGGCACAGGCACTGGCACCTTAAACTACAGAAGCAGTGTTTCGGATTTTCATGGAGAGAAGGGAGCACCGGAATGTGCTGTGGCTGCAAGAAGCGAAGGTATGGTCGAATCGTGGATTAATTGTTCTTCAGATTAG 1413 0.4989 MDSPNSGSMQSSSTAGEEDYDSRADPSSSSISAFLNNNPVPPPQPTTLTTTHVTPFQTHVFDPLSNYLDPTQRSQSHPNTNQILNLDMVWNTVARSEPDLGGLIPCSSSPSPQNSNNQGFLLTQLGAGQSQTRGGGLANVAVSAFPTTLAPESASPRGGFEQNSTSTNTNVVRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRTRLDLFASSNASSSALLRSASAHLEQPPSQTQTPSYLLRPFAHKVQAQPSSVPHNTFPPMLNTLASNNNSGSNSTSIHYQQHPLNMHNPILSLQSILGNNNSSVLVGSKTQQQHSLEITPGAVDSHLKMGGLEELGLSHAHVGGHHHHHHHHQNMNLVSSSSDGALSRVNSNLNINNNMRGPSSADWAQAQRIGGTNDGGVLRSLSGGTGTGTLNYRSSVSDFHGEKGAPECAVAARSEGMVESWINCSSD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02000 470 MobiDBLite consensus disorder prediction 1 50 - -
Spst1g02000 470 Pfam VQ motif 184 211 IPR008889 -
Spst1g02000 470 MobiDBLite consensus disorder prediction 151 187 - -
Spst1g02000 470 MobiDBLite consensus disorder prediction 157 175 - -
Spst1g02000 470 MobiDBLite consensus disorder prediction 1 17 - -
Spst1g02000 470 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 339 IPR039609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02000 Spst-Chr1 28277725 28279137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02000 - - vun:114182982 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02000 1 28277725 28279137 Spst1g02000 1 28277725 28279137 ECH