Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01998 ATGGATCAGTCCCACAAGCTTTCTTCCTTCAGTTGTGAACTGAGAATAATACAAGCCCAAAATGTTGAGGCCATAAAGTCAGCAAGAAACTTATTTGCTAGGTTATATCTTCCTTCAGGGAACAACAAAAGAATTCAACTCAACACCAAAAAAGTTTCCTCAAATATCAATCATGTTCCCTTTTGGAACGAGTCCTTTAGCCTAGATTGTTCATGTCCCCAAGAATTCTTGGAAAGCCTCAAGAAGGAAAGGCTTGTGTTGGAGCTAAGGCAAAGCAAGATTTGGGGGTCACATGTGGTGGGAAAGGGTGAGATTCCTTGGAAGGCAATTCTTGAATCACCAAAGATGGAGTTGAAGGAATGGGTGAAGATGGATTTGGTGAGTGGAAGCAGTGACTGTGATGAAGATGGTGTTAATTTCAAGGCACCAGAAGTGCAAGTGGAGATTAATATAGAGAACAAGAGTAACAGGAGAAAGAGATTGACCAAAAAGTGGGACGAGTGTGGATGCAAACATGGGCATGATCTAAATGCATGGTGCAGCGCTGAAGATTATGATATATTGGCTTTAGGAGCAGTTTTGGAGGCTTTTTGA 594 0.4158 MDQSHKLSSFSCELRIIQAQNVEAIKSARNLFARLYLPSGNNKRIQLNTKKVSSNINHVPFWNESFSLDCSCPQEFLESLKKERLVLELRQSKIWGSHVVGKGEIPWKAILESPKMELKEWVKMDLVSGSSDCDEDGVNFKAPEVQVEINIENKSNRRKRLTKKWDECGCKHGHDLNAWCSAEDYDILALGAVLEAF 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01998 197 PANTHER OSJNBA0006M15.15 PROTEIN 1 196 - -
Spst1g01998 197 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 129 IPR035892 -
Spst1g01998 197 Pfam C2 domain 13 117 IPR000008 -
Spst1g01998 197 Gene3D C2 domain 1 135 IPR035892 -
Spst1g01998 197 ProSiteProfiles C2 domain profile. 1 122 IPR000008 -
Spst1g01998 197 CDD C2 13 123 - -
Spst1g01998 197 SMART C2_3c 11 119 IPR000008 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01998 - - gmx:100791093 327.02