Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01965 ATGGCTTTCATCGCCACCACGGTTGGTGCCAGCACTGTCACCACAGTGGATTGCCAGAAACAAGTAAGATCATGGAGGCTGCTACGTTCCCTCATGGAGCTTCTAATTCCCACCTGCAACTGCACCTTCTTCCTTGAAGAGCAAGACCAATCCCAAAAGTGTCCACCACAAAATCTCACGACTTGTGCCACAATCACTGGCACTATCTTTGGATACCGCAAAGGAAAGGTTAGTTTCTGCATCCAGACTAATGCCAACTCAAGCAACCCGATTCTGCTGCTAGAGTTGGTGGTTCCCACGAGCGTTTTGGCTAAGGAAATGAGAGGGGGCACACTCAGAATTGTGCTAGAGAGTTCATGCAACGACAACAAAAACCATAACCTTTTCTCCACACCTCTTTGGAGCATGTACTGCAATGGGAGGAAAGTGGGATATGCTGTTAAGCGTAGGCCTTCAAATGGTGACTTTGAAGCACTGAGCTTGATGAGTTCTGTTGCGGTAGGGACTGGTGTTATAAACAGTTGCAAGGACCTGCAGCATCAAGAAGACGAGCTTATGTACCTTCGAGCCAACTTTCAAAGGGTTCGTGGCTCCTCCAGTTCTGAGTCTTTTCATTTGATTGACCCTGAAGGAAGCATTGGTCAAGAGCTTAGTATTTTCTTTTTCAGGTCTAAGTGA 678 0.4705 MAFIATTVGASTVTTVDCQKQVRSWRLLRSLMELLIPTCNCTFFLEEQDQSQKCPPQNLTTCATITGTIFGYRKGKVSFCIQTNANSSNPILLLELVVPTSVLAKEMRGGTLRIVLESSCNDNKNHNLFSTPLWSMYCNGRKVGYAVKRRPSNGDFEALSLMSSVAVGTGVINSCKDLQHQEDELMYLRANFQRVRGSSSSESFHLIDPEGSIGQELSIFFFRSK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01965 225 PANTHER - 8 225 - -
Spst1g01965 225 NCBIfam uncharacterized plant-specific domain TIGR01570 65 224 IPR006460 GO:0010274
Spst1g01965 225 Pfam Protein of unknown function, DUF617 65 223 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01965 Spst-Chr1 27820726 27821403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01965 - - gmx:100805400 353.984