Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01954 ATGGGGATCATCACTCGCAGTTCTGCTGGTAGAAAACCAAGTGAAATTATGAGGTTTTTTGTGACAACTTTTATTGGTATAGTTTTCGGATTCTTTATAGGAGTATCAGTTCCAACATTGTCAATAACAAAGTTGAATCTCCCATCTGGCCTGCTTCCCTCCATTGATCTTACGTACATTGGAGACAGATATACAGGTCGCCAGGCATGGGCTTTTATGAATAATAGTCACAAAAGAAGTTCATCGCAAGTTCAACCATTAAATGATACATCAAAGATTTGGGTTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCCGGCATTGTTGAAGCTGAGTCGGACCTTTATTTGCGGAGATTGTGGGGTAAGCCCAGTGAGGATCTAACGTCCAGGCCAAATTACCTTGTGACCTTCACTGTTGGCTATGAGCAGAAAAATAATATTGATGCAGCTGTGAAAAAGTTTTCAGGGAATTTCACTATCCTTCTATTTCACTATGATGGCAGAACAACTGAGTGGGACGAGTTTGAATGGTCAAAGCGGGCTATTCATGTGAGTGCTCGCAAACAGACCAAATGGTGGTATGCCAAGCGGTTTCTGCATCCTGACATTGTGGCACCATACGACTATATATTCATATGGGATGAAGACCTGGGTGTCGAGCATTTTGATGCAGAGGAGTACTTAAAACTGGTGAGGAAGCACGGCTTGGAGATTTCACAGCCTGGTTTGGAACCTAATAAAGCCTTGACATGGCAAATGACAAAAAGAAGAGGTGATCGCGAAGTTCACAAAGTGACACAGGAGAAACCAGGATGGTGTTCTGACCCTTATTTGCCTCCTTGTGCAGCATTTGTTGAAATTATGGCTCCAGTGTTCTCGCGTGATGCATGGCGCTGTGTGTGGCATATGATTCAGAATGACTTGGTCCACGGGTGGGGTCTTGACTTTGCTCTTAGAAGATGTGTGGAGCCTGCACATGAGAAGATTGGAGTTGTTGATTCTCAGTGGATTGTTCACCAAGGTCTTCCCTCTCTAGGGAACCAGGGTGAATCTCAAACAGGAAGAGCACCATGGCAAGGGGTGAGGGAGAGATGCAGAAAGGAGTGGACAATGTTCCAGACTCGGTTGGCAAGTGCAGAAGACGAGTATTACAAGTCAATAGGACTTAGTGATACATCTAATTCCACTGCTCGTTAG 1203 0.4439 MGIITRSSAGRKPSEIMRFFVTTFIGIVFGFFIGVSVPTLSITKLNLPSGLLPSIDLTYIGDRYTGRQAWAFMNNSHKRSSSQVQPLNDTSKIWVPSNPRGAERLPPGIVEAESDLYLRRLWGKPSEDLTSRPNYLVTFTVGYEQKNNIDAAVKKFSGNFTILLFHYDGRTTEWDEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFDAEEYLKLVRKHGLEISQPGLEPNKALTWQMTKRRGDREVHKVTQEKPGWCSDPYLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIVHQGLPSLGNQGESQTGRAPWQGVRERCRKEWTMFQTRLASAEDEYYKSIGLSDTSNSTAR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01954 400 PANTHER OS06G0731900 PROTEIN 12 389 IPR007877 -
Spst1g01954 400 Pfam Protein of unknown function (DUF707) 97 383 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01954 Spst-Chr1 27739179 27742142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01954 - - gmx:100778486 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g01497 3 18414149 18425125 Spst1g01954 1 27739179 27742142 PCT