Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01950 ATGGCGGAGATGGTGAGGCTTCGTGTCGTGTTCGAAGATCGTGGCATGCTAAGCAAGTCAAAGAAGAAGGAAGGATTGAACCGTTGTTGGTTTCTGCTTAAACCCCAACACAACACCATTTCCGATGTTGCCTCTCATCTGCATAACACTTTCGGTCTCCACCGGACCTGTCCCCGTGGCATCATCCTCTTGATGGATGGTTTTGTTTTACCATCTTTTGAATCCACTTGCATTCTGAAGGATAAGGACATTGTCTGTGTGAAAAGAAAAGGAAGCACATCCACTAATGACAAACTTACAATGCTGTCACCTGTGAGTCGTGCTCACGAGTCTATAGAGCTTCCAAATGTTCTTGCGATTGAGGGTCTTCAAGAAGAGTCTGGAGGAGAGGAAACCATGTCCCAAGAGGATAACAAAGTAGAAGATGCTGTCTATGTGGAATCTAAATCGGACGGGAAGGCCACCTCCAAGAAACGAAAAGCTTCAAAGAAGCTCAAGAGCCCTAGTCAGAAGAAGATTAAGTTGTCTACTACAGAAAACTTGTCACACATTCCTGAGGTCCATGAGGAGGAAAATGGAAGCTCTGAAGGTTGTATTCATCACCAACTGAGTCTTGTCAAGAAGGAGAAGAAGAAGTCTTCCAATTTATCTAGCAAGCTGAATAAGTCAAACAACCTTGATAAACAGAAGAATGCCAATAGTGATTGTCCAAGTGAGGAAACCAGGTTTGCTCAACCTCAAGATGAAAGTGGGACTAAAAAGTTCCCTAGCAGAAGTGCTCGGCGGAAGAAATCTAAAAGGAGATGGCTGAGGGAACTAAAGTTAGAGAAGGAGAAGCAGGACAAGCTCCATCAGACTCCAGTGCTTGAAAAAGACCGACAAGAATTACCTATCAGAGATAATAACTGTGTTGTTTCTGATGTACATCAACAATCTGATGAAGAAAGTGAAGAAGAGGATGAAATTGTTCCTGTAGAAATTAGGCCAGGCCACATTCGGTTTGAGCCCCTTAAAAAAGATCATGATCAGGCAGCACCTCAGGATCAGTTTCCAGTGGAAACATTTTTGTGGAATGGAATCACTAACAAGAAGAAGGGCCAGAAATGGGGTAAAGAGACAATGTCATTCTGTAAACAGGATGGCTACGTACATTCCAGTCAAGAGTGTCCTACAGTTCAAAATATTGAAAAGGAACCCACGTTCAATGCAGTAGATTTCGATAAGCTTCAAGCATATACAGGCCTGCCTAAGGAGGGTGACGTAGTAGCTTATCGATTGATTGAGTTATCAGCATCTTTCACTCCTGAACTTTCCTCCTTTAGGGTTGGGAAAATATCTCAGTATGATGCTAAATCAAACAGGATTTGGCTGGAACTGGTTTTAGAATATCCATTTGACTTTAAGAAAGAAAAAGAAGATGCATCTTCTTTTGAGCTGTCTGATACATCCCCTTATCGGGAGGATGGTTCTTTAGAGATAGATTATGCATCGCTTGTTGATGTTCGAATGGTTAAGCATGGTCTACTTGGTTCGAAAACTGTGGTTGTTTCTAGTGAAGCGTTGATCAATCCAACAAAATCAACTAATGGTAGCACTGCTGAAAAACTTGCGGGTGATTCCATGGGATGTTGCCAGCCAGAAAAGGAAGGTCAAATCCGTGATAAAGAAAATGGGGAAGTAAACTTGTGGGAAGAAATTAACAAGGAATTAGAAGCAAAAAAGGCCAAGCTGTCGCAGGATGATGGCTGGAACAGGGGAGAGAGCTCAAGCACGCGGTCATGGTCTCATAGAGCCATGAGATGCAGTGCGTTGGGTCCCACAATGGAGTTTTTAAGGTCCAACAATGGACTTTAA 1854 0.4283 MAEMVRLRVVFEDRGMLSKSKKKEGLNRCWFLLKPQHNTISDVASHLHNTFGLHRTCPRGIILLMDGFVLPSFESTCILKDKDIVCVKRKGSTSTNDKLTMLSPVSRAHESIELPNVLAIEGLQEESGGEETMSQEDNKVEDAVYVESKSDGKATSKKRKASKKLKSPSQKKIKLSTTENLSHIPEVHEEENGSSEGCIHHQLSLVKKEKKKSSNLSSKLNKSNNLDKQKNANSDCPSEETRFAQPQDESGTKKFPSRSARRKKSKRRWLRELKLEKEKQDKLHQTPVLEKDRQELPIRDNNCVVSDVHQQSDEESEEEDEIVPVEIRPGHIRFEPLKKDHDQAAPQDQFPVETFLWNGITNKKKGQKWGKETMSFCKQDGYVHSSQECPTVQNIEKEPTFNAVDFDKLQAYTGLPKEGDVVAYRLIELSASFTPELSSFRVGKISQYDAKSNRIWLELVLEYPFDFKKEKEDASSFELSDTSPYREDGSLEIDYASLVDVRMVKHGLLGSKTVVVSSEALINPTKSTNGSTAEKLAGDSMGCCQPEKEGQIRDKENGEVNLWEEINKELEAKKAKLSQDDGWNRGESSSTRSWSHRAMRCSALGPTMEFLRSNNGL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01950 617 Coils Coil 553 580 - -
Spst1g01950 617 PANTHER COILIN P80 2 616 IPR024822 -
Spst1g01950 617 MobiDBLite consensus disorder prediction 156 170 - -
Spst1g01950 617 MobiDBLite consensus disorder prediction 209 268 - -
Spst1g01950 617 MobiDBLite consensus disorder prediction 574 594 - -
Spst1g01950 617 Pfam Coilin N-terminus 5 177 IPR031722 -
Spst1g01950 617 MobiDBLite consensus disorder prediction 126 196 - -
Spst1g01950 617 MobiDBLite consensus disorder prediction 132 155 - -
Spst1g01950 617 MobiDBLite consensus disorder prediction 217 253 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01950 K13150 - gmx:100776892 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01950 1 27681759 27693550 Spst1g01950 1 27681759 27693550 ECH