Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01942 ATGATTCAATTTAACTCTCTTCAAAATCAGATTGTTTCAATGCTGAAACTGGGAAGTGAGGAATTTATGCAGAAAGTACTCAACAACAGAAGATGGACATTGCCAAGTCCTGAAACGAAAATTCACCAAATAGTACACACACGAGGCCCTAATTTCCTGTTGAACACCCACCCACCTTTTGGTGATGTCAATCGCGTGAGTAAAGAAAGGGATTACTTCTATGTCGTTCGGGATGATTTGTTGCACCCACTTGTTAATGGCAACAAAGCAAGAAAACTCGATGGACTACTTCCTCTGCTTCAGCATTATTCTGTCAGTGATGTGGTTACATGTGGAGGTTGTCAGAGTGCTCACACAGCTGCCATTGCGGTTCTGTGTGCTGAGAGAGGAATTGTGTCACATCTGCTTCTACGAGGAGAGCAGCCTGAAATCTTGACTGGCTATAACTTGATGTCTACTATGTATGGAAATGTCATATATGTTCCAAGAACTATTTATGCCAACAGGGAAGAGATGCTGAAGAGCTATGCCAAGTCCGTGGCTGGTAACGATGGTTCTGTCCTGTGGTTCGGTGATATCATTGAAGCTTCTTCAGCAACTGAATTGTCTACTTCTCCAAATTTCATGCAAATGGATGTAAGTAGAAGTGAGGGAAACCATCACCGAAACATTTTAGTTATCAATGAAGGTGCTGGTGATTCTGTTGCTCTACTAGGTGTTATTCGCTTAGTACAATACTTATCACAGAACCATTTACTTGGCAAAGAAAGACCCATGAAATTTGTTGTAGATGCTGGTACTGGCACAACAGCTGTTGGCTTAGGGCTTGCAGCCCATTGCTTGGGACTCCCATGGGAGGTATATGCTGTCATTCTGGCTGACAAAATTGAAGGGTACAGAAAACAGGAAGCGCATTTAATTTCTGAATTCAAGAAGCATTTTAACATTGAGTTTATTGACCAAAATGTAAATAGAGAAGATGCAGGGATTGTGAATTGGGTGGAACGTGGCCGTCCAAGAAAATTTGGTAATGTTTTGGAGGGGGAAGTGGAAACATGTCAGCAAATTGCCCAACAAACTGGAATTTTGGTGGATCCTGTGTATACATTAGCTGCTTGGGAAACAGCGATGCTTCTCTCCAGCAGCGATGCTGAAGAAGGGCCAGAAGTGGTGTTGCTTCACACTGGAGGCACGTTGGGAATGTTTGGACTGGCACAGAGAGAAACAGAAGAATGCAGGAGGTAG 1245 0.4305 MIQFNSLQNQIVSMLKLGSEEFMQKVLNNRRWTLPSPETKIHQIVHTRGPNFLLNTHPPFGDVNRVSKERDYFYVVRDDLLHPLVNGNKARKLDGLLPLLQHYSVSDVVTCGGCQSAHTAAIAVLCAERGIVSHLLLRGEQPEILTGYNLMSTMYGNVIYVPRTIYANREEMLKSYAKSVAGNDGSVLWFGDIIEASSATELSTSPNFMQMDVSRSEGNHHRNILVINEGAGDSVALLGVIRLVQYLSQNHLLGKERPMKFVVDAGTGTTAVGLGLAAHCLGLPWEVYAVILADKIEGYRKQEAHLISEFKKHFNIEFIDQNVNREDAGIVNWVERGRPRKFGNVLEGEVETCQQIAQQTGILVDPVYTLAAWETAMLLSSSDAEEGPEVVLLHTGGTLGMFGLAQRETEECRR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01942 414 FunFam D-cysteine desulfhydrase 2, mitochondrial 88 189 - -
Spst1g01942 414 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 63 407 IPR036052 -
Spst1g01942 414 Gene3D - 88 190 IPR036052 -
Spst1g01942 414 FunFam D-cysteine desulfhydrase 2 mitochondrial 211 411 - -
Spst1g01942 414 Gene3D - 200 409 IPR036052 -
Spst1g01942 414 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 22 411 IPR027278 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01942 K05396 - gmx:100801680 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01942 1 27632018 27637158 Spst1g01942 1 27632018 27637158 ECH