Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01941 ATGAATCCTCTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACCGGGCCAACCCTGTGGTGGCCAAATCTCCCACGCAGTGTCAGCTAGGGCTCGATGCGCCCGTCAGGACGGTGAACTACGCTTCCAAATCGACCTTATCCACGCTCGATTCCTCCGTCGGCGCGGATTCCGTCAAGGCAGCCGCCGCCGTGGATCTCGAGGAGGAGGAGGAGCCCCGCGATTCGAAGGCGTTTGCCGGCGGCAATGGCGCCGGCGTTGCCGGGAGTGTTGCTGGGATCCTGTACAAGTGGGTGAATTACGGGAAGGGGTGGAGGTCGAGGTGGTTCGTGCTGGAAGATGGCGTGCTTTCGTATTACAAGATTCACGGACCGGACAAGATCTTGATGAGTCCGGCGAGGGATAGGAGCGTGAGGGTGATTGGGGAAGAGTCATCCAAGTACGTCAAGAAGGCGAATTGGAATCTGAATCGAGCACCTTCTGGAGGAGTAGGGGGAGGTAACAGTAACAACGGGAAGCAATGCAAACCGTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTTCCAGCAAGTCTGATGATAAACGGCTTTCCATATTTACTGGGACGAAAACTCTCCACTTGCGATGTGTATCTAGAGAAGATAGAGCCATGTGGATTGAGGCCTTGCAGTCTGCAAAAGATCTTTTTCCCAGAGCTCTAACAAGTAGCGATCTTGCAACGTCAGAGGACATTGTGGTTTCAACGGAGAAGCTGCGATCACGATTGTCACAGGAAGGCATAAGTGAAGTAATCATTAATGACTGTGAGTCTATTATGCTTTCTGAAGTATCTTATCTCCAAAGCAAGTTGAAGTACCTTCAGCAGAAACATGTTATGTTGCTGGACACATTGAAACAACTGGAGTCAGAGAAAATAGAGTTGGAAACTACTGTAGTTGATGAAACAAAGGAACGTGAATCATATTGTGGACAAGGAAATCGAAGGTTCAGCGATTTCTATTCTGTCATGTCAGAGGGTAGTGCTACTGATTCGGTGGCTGATAATGAAAGTCAAGATGGAGCAGATGTTGAAACAGATGATGATGATAGAACATATTTTGACACAAATGAGTTTTTGTATTCTGATGCCTTAAGAAGTGCATCCTATCGGAGTAGGGAGGGTATGGGCAATGCCAGTATATATGATAGAGATTATATTTGTTATGATGGTGTGCATGGTTTTGAGAAGGAGATCAAAGATGTAAGGTATCCACACGTCAAAAGAAGGGATAACTTACCAGAGCCAAAAGAAAAGGAGAAGCCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCAGGAGTATGTCTCCCTGTTTATTTTAATGAACCACTATCTTCTTTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAATGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTATCTAGCTATGCATCAACTGAAGGTCGACAATGTAAACCTTTTAATCCTTTACTTGGGGAGACTTACGAAGCTGACTATCCAGATAAAGGACTTAGGTTCTTTTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCACTGCGAAGGAAGGGGATGGAAGTTTTGGGCGGATTCAAATTTGAAAGGAAAATTCTGGGGACGTTCAATCCAGTTAGATCCTGTGGGTGTCCTAACTTTACAGTTTGAGGATGGTGAAACATTTCACTGGAGCAAGGTCACTACTTCCATATACAATATAATATTAGGTAAAATTTATTGTGACCACTATGGTACCATGCACATCAAGGGCAGCGGAAACTATTCTTGCAAATTGAAATTCAAGGAGCAATCTATTATAGACCGAAATCCACATCAGGTCCATGGATTTGTTCAAGACAACCGAACCGGGGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTTGGGGATCCAACCACCAAGCCAAAAGGTTATGATCCGATGACAGAAGCTGCGATATTGTGGGAAAGGGACAACTCTGTATCCAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCATTAAATGAAATATTACCTGATTTATTAGACAAGTTGCCTCCAACCGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAACTGGCAAATGCAGAGAAACTTAGACTTGAACAGTTACAGAGACAGGCAAGAAAGATGCAAGAGAGAGGATGGCAGCCGAGATGGTTTAAGAAGGGTGAGGATGGTTGCTACCGATATAACGGTGGATATTGGGAAACAAGAGAAAAGAATAATTGGGATGGAATCCCCGATATATTTGGACAAAGTTGTGATTTGCCTTCATGTTCGGAAGAGACTGTATCCTACTGA 2460 0.4415 MNPLCCIAPVSIDRDRANPVVAKSPTQCQLGLDAPVRTVNYASKSTLSTLDSSVGADSVKAAAAVDLEEEEEPRDSKAFAGGNGAGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDRSVRVIGEESSKYVKKANWNLNRAPSGGVGGGNSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATSEDIVVSTEKLRSRLSQEGISEVIINDCESIMLSEVSYLQSKLKYLQQKHVMLLDTLKQLESEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDRTYFDTNEFLYSDALRSASYRSREGMGNASIYDRDYICYDGVHGFEKEIKDVRYPHVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFHWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAAILWERDNSVSKTRYNLSPFAISLNEILPDLLDKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKGEDGCYRYNGGYWETREKNNWDGIPDIFGQSCDLPSCSEETVSY 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01941 819 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 91 791 IPR000648 GO:0008289
Spst1g01941 819 Coils Coil 285 319 - -
Spst1g01941 819 FunFam oxysterol-binding protein-related protein 1D isoform X1 524 697 - -
Spst1g01941 819 SUPERFAMILY Oxysterol-binding protein-like 433 805 IPR037239 -
Spst1g01941 819 MobiDBLite consensus disorder prediction 342 362 - -
Spst1g01941 819 Gene3D - 735 799 - -
Spst1g01941 819 Gene3D - 524 691 - -
Spst1g01941 819 SMART PH_update 89 231 IPR001849 -
Spst1g01941 819 FunFam Oxysterol-binding protein-related protein 2A 735 805 - -
Spst1g01941 819 SUPERFAMILY PH domain-like 91 229 - -
Spst1g01941 819 ProSiteProfiles PH domain profile. 88 229 IPR001849 -
Spst1g01941 819 Coils Coil 746 766 - -
Spst1g01941 819 Gene3D - 88 231 IPR011993 -
Spst1g01941 819 Pfam Oxysterol-binding protein 439 792 IPR000648 GO:0008289
Spst1g01941 819 Pfam Pleckstrin homology domain 93 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01941 Spst-Chr1 27619861 27625964 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01941 K20456 - gmx:100788779 1563.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01941 1 27619861 27625964 Spst1g01941 1 27619861 27625964 ECH