Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01931 ATGGCCTCGTATGATGAACAACAAGGAAAGCCTTTACCCAAATTTGGGGAATGGGATGTGAACGATCCTGCTTCAGCCGAAGGATTCACTGTTATATTCAACAAAGCCAGAGATGAAAAGAAAATTGCCTCAGTTTCAGGACGATTCCCTTCTCAGCGAAGACTTGATTCTCGAAAGCGCAAGAATCATAAAAAGATCAAGAGTTCCTCTAACTCAAAGCAAATTGTGGTGAAACAAATATCACGTGGAAGTAAGGACTATGTTGACTGCATAATTTACGAGGAACAGAACAGAACAGGAAAGTGCAAGGATCGATTCAATGCCACTGTTTGA 333 0.4114 MASYDEQQGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKIASVSGRFPSQRRLDSRKRKNHKKIKSSSNSKQIVVKQISRGSKDYVDCIIYEEQNRTGKCKDRFNATV 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01931 110 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 64 IPR040387 -
Spst1g01931 110 MobiDBLite consensus disorder prediction 44 75 - -
Spst1g01931 110 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
Spst1g01931 110 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01931 Spst-Chr1 27564451 27566840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01931 - - gmx:102669045 118.242