Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01925 ATGGCACACGCCTTGTCCTCTAATTTGGCTCTTAACCTTCCCACTTCGAGGTATCTCCACCACTCAAGACCAACCCAGTTGAAGCCAGTGAAGATCATCATGATGGAGGATGCAAGAGAAAAGCTTGACCACATCCCAAAATCCAACAAGCACCACCATCCTCTCCCAAAAAAAAAAGTTGCCCCAACTGCACCCGTAGGGTTGTGGGACAGGTTTCCTACGGCAAGGACAGTGCAAGAGATGATGGAGACGATGGAGAGGATGATGGAGGACCCTTTTGCATTTAGCACACTTGAGTGGCCTTCATCACCCTTGCCAAGTGAGGGTGTGGGAGGGTATAGAAGAAGGGGAAGAGCACCTTGGGAAGTCAAAGAAGGAGAGAGTGAATACAAGATGAGGTTTGATATGCCTGGGATGAAGAAAGAGGATGTGAAAGTTTGGGTGGAGGAAAAGATGCTAGTGGTTAGAGCAGAAAAAGCACCAAAGAAGAACGAGATATCGGAACAAGAAGAGGAAGAGGGATGGTCTGCAAAGAGTTATGGTAGGTATAGCAGTAGGATTGCTTTGCCAGACAATGTGCAGTTTGAGAATATTAAGGCCGAGGTTAAGGATGGTGTCCTCTACATAGCCATTCCCAAGGCTACCACTTCCTCCAACATCCTAGATATCCAAGTTCAATGA 681 0.4714 MAHALSSNLALNLPTSRYLHHSRPTQLKPVKIIMMEDAREKLDHIPKSNKHHHPLPKKKVAPTAPVGLWDRFPTARTVQEMMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEVKEGESEYKMRFDMPGMKKEDVKVWVEEKMLVVRAEKAPKKNEISEQEEEEGWSAKSYGRYSSRIALPDNVQFENIKAEVKDGVLYIAIPKATTSSNILDIQVQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01925 226 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 22 226 IPR044587 GO:0009408
Spst1g01925 226 SUPERFAMILY HSP20-like chaperones 102 217 IPR008978 -
Spst1g01925 226 Gene3D - 68 225 IPR008978 -
Spst1g01925 226 CDD ACD_sHsps-like 122 213 - -
Spst1g01925 226 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 112 226 IPR002068 -
Spst1g01925 226 Pfam Hsp20/alpha crystallin family 123 226 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01925 Spst-Chr1 27521614 27522655 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01925 K13993 - gmx:100811966 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01925 1 27521614 27522655 Spst1g01925 1 27521614 27522655 ECH