Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01914 ATGTGGGGACTTCTCCGAACACGAACGTGTCTGCGATATTCCGAGGCCCTTCTTCTTCATCAACCATGGAAGAAGACGGTAGGGTTTTGTTCTTCGTCCTCCGTCGACGGCCGTAAATGCTTTCTGGAACTGCCGGAGATCGAGAAGGTTCTGACGGAGATCAAAGCTGACGATGTGAAGGTGATACCGATTCCCAAACACTGTGATTGGGCTGATTTCATGGTTCTCGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATCGCCCAAGCCCTAATTTACAAGGCTAAACAGAAACAGAGAGGAGCTGACCGAATGATGTTACCGAGTGTGCAAGGGCAAGCTGGAGGAAAGTGGATCGTCATTGACTCTGGCAAAGTAATAGTTCACGCACTTGATGAAAAGGCTAGAGCGTACTACAATTTGGAGGGTCTTTGGACCCCGGGGACAATTCAAAATGCACCTGATGGGGATTTACAAAAGGCTTTGGTGAAGGTTCGTCGGAAAAACAATTCGAAGAAACCTGCACAAAAGAATACTTAA 543 0.4843 MWGLLRTRTCLRYSEALLLHQPWKKTVGFCSSSSVDGRKCFLELPEIEKVLTEIKADDVKVIPIPKHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQRGADRMMLPSVQGQAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTPGTIQNAPDGDLQKALVKVRRKNNSKKPAQKNT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01914 180 PANTHER IOJAP SUPERFAMILY ORTHOLOG 33 156 IPR004394 -
Spst1g01914 180 SUPERFAMILY Nucleotidyltransferase 46 153 IPR043519 -
Spst1g01914 180 FunFam Mitochondrial assembly of ribosomal large subunit 1 42 158 - -
Spst1g01914 180 Hamap Ribosomal silencing factor RsfS [rsfS]. 34 147 IPR004394 -
Spst1g01914 180 Gene3D Beta Polymerase, domain 2 43 156 IPR043519 -
Spst1g01914 180 Pfam Ribosomal silencing factor during starvation 46 146 - -
Spst1g01914 180 NCBIfam ribosome silencing factor 46 146 IPR004394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01914 Spst-Chr1 27395532 27398097 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01914 - - var:108320297 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01914 1 27395532 27398097 Spst1g01914 1 27395532 27398097 ECH