Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01911 ATGCAAAGCAGAGGATTCTCAAAGGAAGGAGTTCTTGATGGCAATGATGTTGTGCATCCAGTTCTGATCATTGGCGCTGGACCTGTGGGTCTTGTTCTCTCTATTCTTCTCACAAAATTAGGTATTAATTGCACAGTTTTGGAGAGAAACAAGGCATTTTCAAAACATCCACAAGCACACTTCATCAACAATCGATCCATGGAGATATTTCGCAAAATTGATGGCCTTGTTGAAGAGATCCAAAGGTCTCAACCACCAGTAGATTTATGGAGGAAATTTATATATTGTACTTCCCTCTCTGGTTCAATTCTTGGATCTGTGGATCACATACAACCTCAAGATCTTGAGCATGTTGTCAGCCCAGTCTCTGTTGCGCACTTCTCACAGTACAAGCTAACTATGTTACTACTCAAGCGACTTGAAAATCTAGGCTTTCAAATATGTGCACCTGAAAGCTTGGAAGGAAATGAACAGTCTTGTGAACAGAAAATAATGATGGGCCATGAATGTGTATCCATCGATGCCAGTGATGACTTTGTAACAGTAACTGCATCTTCTCTCATTAAAGGGAAGCGTGTAGAACAGAATATTCACTGTAGCATCCTTATTGGTACGGATGGTGCAGGTAGTACTGTAAGAAAGCTTGTAGGAATAGAGATGAGAGGTGAGAAGGACTTGCAAAAACTTGTCAGTGTCCATTTCTTTAGCAGAGACCTTGGCCAGTTTTTGCTTAAGGAGAATCCTGGTATGCTTTTTTTTATCTTCAACACTGAAGCTATTGGGGTCCTTGTTGCTCATGATCTCAGGCAAGGGGAATTTGTATTGCAGATACCCTTTTATCCACCTCAGCAAACAATTGAGGATTTCAGTCCAAAGGCATGTGAGAAATTGATCAGCAAACTTGTTGGTAGAGAGTTTGGAGATGTAGATGTAATTGATATAAAGCCATGGATTATGCATGCTGAAGTTGCTGAGAGGTTTATGTGTAGTGGCAACAGAATATTACTTGCTGGTGATGCTGCTCATCGATTTCCTCCTGCTGGTGGATTTGGAATGAACACCGGCATTCAGGATTCCCATAATCTTGCCTGGAAAATTGCTTATGTAATTAAGGGTATTGCGCCAATTTCAATGCTAAATACCTATGAAACTGAACGTAAACCGATTGCTTTATTTAATACAAGATTAAGTCTAGAAAACTATAAAGCTGCCATGTCTGTTCCTGCTGCTCTTGGTCTTGATCCAACTGTTGCAAACACAGTACATCAATTTATAGTTAATGGTATTGGTTCCATCTTACCATCCGGATTGCAGAAGGTAGCTTTGGATGGAATTTTTGGACTTGGTCGTGCCCAGCTCTCAGAACTTGTCCTAAATGAAAGTAACCCTCTTGGATCGTCAAGATTGGCTAAGTTAAAATATATATTTGAAGAAGGAAAAAGCCTTCACCTTCAGTTTCCTGCTGAAGATCTTGGTTTTAGGTATCACTGA 1491 0.4024 MQSRGFSKEGVLDGNDVVHPVLIIGAGPVGLVLSILLTKLGINCTVLERNKAFSKHPQAHFINNRSMEIFRKIDGLVEEIQRSQPPVDLWRKFIYCTSLSGSILGSVDHIQPQDLEHVVSPVSVAHFSQYKLTMLLLKRLENLGFQICAPESLEGNEQSCEQKIMMGHECVSIDASDDFVTVTASSLIKGKRVEQNIHCSILIGTDGAGSTVRKLVGIEMRGEKDLQKLVSVHFFSRDLGQFLLKENPGMLFFIFNTEAIGVLVAHDLRQGEFVLQIPFYPPQQTIEDFSPKACEKLISKLVGREFGDVDVIDIKPWIMHAEVAERFMCSGNRILLAGDAAHRFPPAGGFGMNTGIQDSHNLAWKIAYVIKGIAPISMLNTYETERKPIALFNTRLSLENYKAAMSVPAALGLDPTVANTVHQFIVNGIGSILPSGLQKVALDGIFGLGRAQLSELVLNESNPLGSSRLAKLKYIFEEGKSLHLQFPAEDLGFRYH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01911 496 Gene3D - 20 390 IPR036188 -
Spst1g01911 496 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 18 495 - -
Spst1g01911 496 Gene3D - 87 326 - -
Spst1g01911 496 SUPERFAMILY FAD/NAD(P)-binding domain 20 411 IPR036188 -
Spst1g01911 496 Pfam FAD binding domain 20 390 IPR002938 GO:0071949
Spst1g01911 496 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 382 398 - -
Spst1g01911 496 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 198 213 - -
Spst1g01911 496 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 346 362 - -
Spst1g01911 496 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 364 382 - -
Spst1g01911 496 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 20 42 - -
Spst1g01911 496 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 331 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01911 Spst-Chr1 27367596 27373149 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01911 - - gmx:100794253 945.651