Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01905 ATGAAAAGGAGTCGAAAATTTGCGGTTCAAGTGATGCCACAGCCAGAAAAATCGCTCGGTAACAACCTTCCAATAATTCGCATTCCAGGAGATGGTAGATGTTTGTTTAGGTCTGTGGTCTATGGTGCATGCCTCAGATCTGGGGAACCATCTCCAAGTCTTAGTAGGCAAAAAGAACTTGCAGATGAACTCAGAGCCAAAGTTGTGGATGAATTCATCAAGAGAAGGGCAGACACTGAGTGGTTTCTAGAGGGTGACTTTGACACCTACACAGTACAGATGCGAAAACCTCACATATGGGGAGGAGAACCTGAACTTCTCATGTCCTCACATGTTTTACAGATGCCAATAACAGTGCTCATGCAGGATAAGAATTCGAATAACCTTAAAGTTATAGCTGAATATGGTGAGGAGTATGGGAAGGATAACCCTATTCGAGTCATCTATCATGGCTACGGCCACTACGATGCATTATTGAAGAGTTCCACATATTAG 495 0.4323 MKRSRKFAVQVMPQPEKSLGNNLPIIRIPGDGRCLFRSVVYGACLRSGEPSPSLSRQKELADELRAKVVDEFIKRRADTEWFLEGDFDTYTVQMRKPHIWGGEPELLMSSHVLQMPITVLMQDKNSNNLKVIAEYGEEYGKDNPIRVIYHGYGHYDALLKSSTY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01905 164 SUPERFAMILY Cysteine proteinases 22 160 IPR038765 -
Spst1g01905 164 FunFam OTU domain-containing protein 8 164 - -
Spst1g01905 164 CDD OTU_plant_OTU4-like 22 159 - -
Spst1g01905 164 Gene3D - 10 164 - -
Spst1g01905 164 Pfam OTU-like cysteine protease 29 155 IPR003323 -
Spst1g01905 164 ProSiteProfiles OTU domain profile. 23 161 IPR003323 -
Spst1g01905 164 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 27 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01905 Spst-Chr1 27284601 27286332 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01905 K18342 - gmx:100792132 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01905 1 27284601 27286332 Spst1g01905 1 27284601 27286332 ECH