Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01902 ATGTTTGGCTCCGCTCAACCTTCTTCATCTCCGTTCGGCACCCCTTCGTCAACCCCAGCATTTGGCACCCCTTCTTCTACACCCGCATTCGGAACCCCTTCTTTCGCTACCCCTTCTTCTACCCCTGCATTCGGAACCCCATCTTCAACACCGGCGTTCGGCGCTTCGTCTACCCCTGCCTTCGGTTCCTCCCTCTTCTCCACGCCCTTTTCTTCTCAACCACAACAGCAGCAACAGCAGCAGCAACAACAAACTCCACTATTTCAACAACAACCAACCTCTTCTGCTTTCGGCTTTCAAAATCTCCTCGCAGCGCCACAACCCTCGCCTTTCGCAAATGCCCAATTAACCACTCAGATGGCTAACGTAGCACCCGTTCCGTTCTCTCTCGCCGATCGCGATGTTCAAACAATAGTTGATGCTTACAAGGAAGATCCTGGAAACCCCAAATACGCTTTTAAGCATTTGTTGTTCAGTGTAACAGAACCACAGTTTAGAGTGAAGCCTGCTGGTGTATCAGACATCATGTGGGCGGAGGCAATGGGGAAGCTTGAGGGTATGGACAGTGCGGATAGAGAACGTCTGTGGCCACAGCTTGTCCAGGGTTTTAAGGATCTTTCACAACGCCTTAAGATACAAGATGAAGTCATTGTTTCTGATGCAGAGAGATTGCGTATAACCCAAAGCAATGTTAAAATGCTCCAAAGACATTTTCAGGCTGATACTCTTCCATGGATTCAAAGACTAAAACAAAAAGAACAAATTCTCCAGCAACGTCTTTTAAGAGTAATGAGAATAGTGGAGGCATTGGAGGGAAAAGGCTGCCGTATACCCTTAACAAAAGGGGAAGCTGAGCTTGCTGAGAAATTAGCCACAATAACTAGACAGCTGAAAGGATCTGGAGCGGAACTGTCTAGAAGAGTACAAAATCTACTAACTGTATCTCGTGTTAAAGCTAATAGCAATGGATTTGGTGGCTCCGTTTATCTTCCAGGGTCAACCAAAATTCATGATCAGAGTCTTGCTGACCTACAGGAGGTTTTACAACAGCAAATGGAGGCCATTGCGAGACTTGGCGGTGTTCTAAAGCGAGATATACGAGATATGGAGATTATGTTCACTGATGACACAGGAAGAATTGAAAATGGGAATTTAATTTGA 1161 0.4625 MFGSAQPSSSPFGTPSSTPAFGTPSSTPAFGTPSFATPSSTPAFGTPSSTPAFGASSTPAFGSSLFSTPFSSQPQQQQQQQQQQTPLFQQQPTSSAFGFQNLLAAPQPSPFANAQLTTQMANVAPVPFSLADRDVQTIVDAYKEDPGNPKYAFKHLLFSVTEPQFRVKPAGVSDIMWAEAMGKLEGMDSADRERLWPQLVQGFKDLSQRLKIQDEVIVSDAERLRITQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRLLRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLTVSRVKANSNGFGGSVYLPGSTKIHDQSLADLQEVLQQQMEAIARLGGVLKRDIRDMEIMFTDDTGRIENGNLI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01902 386 PANTHER NUCLEOPORIN P54 1 377 IPR024864 GO:0005643
Spst1g01902 386 MobiDBLite consensus disorder prediction 1 91 - -
Spst1g01902 386 Pfam Nucleoporin complex subunit 54 168 312 IPR025712 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01902 K14308 - gmx:100797030 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01902 1 27264480 27267629 Spst1g01902 1 27264480 27267629 ECH