Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01898 ATGGATTGGCAAGGGCAAAAGCTAGCAGAACAGCTAATGCAGATAATGCTGATTGCAGTTGCTGTGATTGCATTCGCAACTGGATATCTTATGGCTTCTTTCCAAATGATGATCCTCATATATGCTGGTGGTGTGGTTCTCACCACATTGGTCACTGTCCCTAATTGGCCTTTCTTCAACCGCCATCCTCTCAAGTGGTTGGATCCGAGCGAATTAGAAAAGCATCCAAAGCCTCAACCATCTCTGAATATAAATTCAAAGAAGAAATCCGTTAAGAAATCCATTTTCTCTTGCAACCATCTTTTTACCTTTTTATCTCCCTCCCGTCCTACACCCGCACATGGGTTGATCTTGGTTTATTGCCTTTCTGCTTGTCATCTCTCTGTTGATCGCGTTAGTCTCTTTGCTTACAAAGAACGAGACACTTATTGGTGGGTTGTAGTTGTGATGGTAATATATTCATCATGTGTTTCTGCCAAACTGAGTATTTTGGCTGTAACACCAGATATACTTCGAATGAGTGTTGTACAGGTTCCAAATGTAAGTTTCGCTAATGGCAATTCGTGA 567 0.4162 MDWQGQKLAEQLMQIMLIAVAVIAFATGYLMASFQMMILIYAGGVVLTTLVTVPNWPFFNRHPLKWLDPSELEKHPKPQPSLNINSKKKSVKKSIFSCNHLFTFLSPSRPTPAHGLILVYCLSACHLSVDRVSLFAYKERDTYWWVVVVMVIYSSCVSAKLSILAVTPDILRMSVVQVPNVSFANGNS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01898 188 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 1 90 IPR009542 GO:0005787|GO:0006465|GO:0016020
Spst1g01898 188 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 1 70 IPR009542 GO:0005787|GO:0006465|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01898 Spst-Chr1 27145504 27146475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01898 K12946 - gmx:100801319 160.229