Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01892 ATGGAGTTCTCTCAAGATGATTTCGATCGGTTACTGTTATTCGAGCACACGCGGAAGACCGCTGAAGCAAACTACGCGGAGAATCCTCTTGACGCTGATAATCTGACCAAGTGGGCGGGAGCTTTGATCGAGTTGTCGGCATTTCAGAGTCCTGGGGATTCCAAGGCGATGATTGATGATGCCCTTTCAAAGCTGGAGGAGGCTTTGCTGATCAATCCAAAGAAGCACGACACTCTTTGGTACCTGGGAAATGCACACACGTCGTATGCATTTCTAACCCCCAATGTCAGTGAGGCAAAGGGTTATTTTGACAAGGCACATGAATATTTCCAGAAAGCTGTGGATGAGGATCCAGAAAATGATCTCTATAGAAAGTCCTTGGAAGTTGCTGTGAAGGCTCCTGAACTACACATGGAGATCCATAATAATGGGTTTGGTCCAATGAATAATGCGGGATCTTCTGCTACTTCAAAGGGAAAGGAATCTAAAAGGCAGAAGAACAATGACTTCAAGTATGACATATTTGGATGGATTATTCTTGCAGTGAGTATAGTAGCATGGGTGGGAATGGCCAAATCTAACATTCCCCCGCCACCTCCTAGATAA 606 0.4521 MEFSQDDFDRLLLFEHTRKTAEANYAENPLDADNLTKWAGALIELSAFQSPGDSKAMIDDALSKLEEALLINPKKHDTLWYLGNAHTSYAFLTPNVSEAKGYFDKAHEYFQKAVDEDPENDLYRKSLEVAVKAPELHMEIHNNGFGPMNNAGSSATSKGKESKRQKNNDFKYDIFGWIILAVSIVAWVGMAKSNIPPPPPR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01892 201 ProSiteProfiles TPR repeat profile. 87 120 IPR019734 GO:0005515
Spst1g01892 201 Pfam Plant specific mitochondrial import receptor subunit TOM20 8 192 - -
Spst1g01892 201 Gene3D Tetratricopeptide repeat domain 1 153 IPR011990 GO:0005515
Spst1g01892 201 SUPERFAMILY TPR-like 22 128 IPR011990 GO:0005515
Spst1g01892 201 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED 1 201 IPR010547 GO:0005742|GO:0045040
Spst1g01892 201 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01892 Spst-Chr1 27112708 27116552 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01892 - - gmx:100775949 366.696