LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g01890	AATATGAATGGTTGCAATTCCGATTTTGATGGAAATGGTCTTTCCATGGAAGTTTCAGCCATATATCTTGCCATGAAAAACTCAAAGCTGGAATGTGTTGATGAGCACGGTCAGGATCCAATGTCTTCTGACATATGCACAGAGGAGGATGAGTTTGAGGATTTTGATGACTTTGACCCATACTTATTCATAAAGACCTTACCAGACTTGTCAACAGTGGTTCCAACTTTTAGACGATTGTTGTTACCTAAGCAGACTCGTAGTTGCCCTTCAACTACTCTTGTTCTGGACTTGGATGAAACTTTGGTGCATTCTACCCTGGAACCTTGTGGGGATGTAGACTTCACATTTCCTGTTAATTTCAATTGTGAGGAACACATTGTCTATGTACGCTGCCGCCCTCATCTGAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTTGAGATTATAATATTTACAGCTAGTCAAAGTATTTATGCTGAGCAACTTCTAAATGTTCTTGATCCTAAGCGGAAGATATTTCGCCATCGGGTATATCGTGAATCTTGTGTTTATGTGGAGGGGATTTATCTCAAAGATTTAACAGTGCTTGGTCGTGATTTGGCACGCGTTATAATAATTGACAATTCCCCACAGGCATTTGGATTCCAAGTGGATAATGGAATACCGATTGAGAGTTGGTTTGATGATCGTTCAGACCAAGAATTGCTTTCATTACTTCCGTTCTTGGAGAGCTTGGTTGGTGTTGATGATGTCCGGCCACTAATTGCAAAGAAATTCAACCTGCGGGAGAAAATTGCTGCAGCTACGCAACCAGTAAATACAAATAGAAGAGATTTCGTCGTTGCACAGAAAGTCAAGGAAGCTGAAATCACAGAGCAGGATTCACTTCTTCTCACGAGGAATCTGCTCCGAATTGCCATATTCAATATCAGTTATATCAGAGGACTATTTCCTGAGAAGTATTTCAATGATAAGTCTGTTCCCGCTTTAGAGATGAAGATAAAAAAACTAATGCCAGTGGATGCCGAGTCTCGCAGACTAATTGATTGGATGGAGAAAGGTGTGTACGATGCTTTACAGAAGAAATATCTGAAGACGCTTCTGTTCTGCGTGTGCGAAGCAGTGGACGGACCAATGATTGAGGAATATGCATTTTCCTTCAGCTATTCCGATTCTGACAAACAAGAGGTTTCAATGAACATCAACCGCACTGGAAACAAAAAGAACCGGGGGGCCTTCAAGTGTAACTCGACTACAGAAATTACTCCCCAACAGATGAGGAGTTCTGCGTGTAAAATGATCCGAACTCTAGTTCAGTTGATGAGAACTCTCGAGAAAATGCCAGAAGAGCGTACCATTCTGATGAAGCTCCTCTACTACGATGACGTGACTCCTGCTGATTATGAACCTCCTTTCTTCCGGGGCTGCACAGGTGACGAAGCTTATCATCCATGGGAGAAAAATCCTTTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCACTTCGTATTAGCTCTGAAGGTGAAGAGTGTACTCGACCCTTGTGAGGATGATAATGAGGGAATTCCGGACGATATGAGCAATGGCGATGATTCAATGCAGCAAAATGAGTATTATGATACTGACAGTGAGGTTGATCTTACTCAAGGGAATAGATATGTAGTTGCTCCAATAGATAAACAGAAAGAACAGGAAGATAATGGCATGATTGATGAAGATAATACACAGGATCCGGTAGAAGATGAACAACAACAGGTCCGGGTCAAGGAGTGGATCAAATGTTGTCACCTTGAGACAATTGAACTCACTGATGTTCTATCTAATTTTCCAGACATCTCCGTGGTTCTAACTGAAGAGATCATGGATAAGCTTGTTGAGGAAGGTGTCCTGTCCAAGATAGGGAAGGAATCCTACGCCATTAATAAGGACAAGAACCTTGAATATGAGTTCACCACTGTGAAAGAAGAAATTGACGGTCAACTTCCTAAAGTCTTTGACAGAGCTTTGCAGGTTGAAGATCGCTTATACATGAAAGCTCTCTATCATGCTCTTCCAATGACACACGTGTCAATCAGTAAGCTTCAAAGTTTGCTTGAGGGAGAAGTAAACCAGACAGCAGCTCGAAAGATAATTGATAAAATGGTGCGGGATGGTTTTGTTGAACCCAAAGGCAACAAAAGATTAGGGAAACGTGTTATCCATTCGGAGTTGACTGAAAGGAAATTCATTGAAGTCCAGAAAGCTCTAAGTGATACTGAAGCTATGGATGTTGATCACTGTGAACCAAATAGCAAGTCCAAATTAATTGGTTTTCGTTTAAATGGAAGCAACCATGACGTGTCTACATGCGGGGTTCTCCACTCCATTGGGTCAGATTTAACACGAATGAAAGTGACATCTGAGACAAACTATACTGACTCCGGCAATGACCAGAAAACAACAACGGCAAAAGAGGCCCGGACTACCCCCATAAGCAGGCCTGTTATTTCAAGAGAGAGTTTCGCGATAGGCAAAGAGAATGGCAGAATAAATGGCATTGCAAATCAAGGGGACGAAGCTGATACACTTATATGCAGTAAGTCTTCCCAAGAGAAACGATCAAGGAAAACTAGCGCGGTGAAGGAGCCTATCCATCAAAGTATGAAACGACAGAGATCTGAGGTTCTGTGA	2673	0.4186	NMNGCNSDFDGNGLSMEVSAIYLAMKNSKLECVDEHGQDPMSSDICTEEDEFEDFDDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSTLEPCGDVDFTFPVNFNCEEHIVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGIYLKDLTVLGRDLARVIIIDNSPQAFGFQVDNGIPIESWFDDRSDQELLSLLPFLESLVGVDDVRPLIAKKFNLREKIAAATQPVNTNRRDFVVAQKVKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSDKQEVSMNINRTGNKKNRGAFKCNSTTEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTGDEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIPDDMSNGDDSMQQNEYYDTDSEVDLTQGNRYVVAPIDKQKEQEDNGMIDEDNTQDPVEDEQQQVRVKEWIKCCHLETIELTDVLSNFPDISVVLTEEIMDKLVEEGVLSKIGKESYAINKDKNLEYEFTTVKEEIDGQLPKVFDRALQVEDRLYMKALYHALPMTHVSISKLQSLLEGEVNQTAARKIIDKMVRDGFVEPKGNKRLGKRVIHSELTERKFIEVQKALSDTEAMDVDHCEPNSKSKLIGFRLNGSNHDVSTCGVLHSIGSDLTRMKVTSETNYTDSGNDQKTTTAKEARTTPISRPVISRESFAIGKENGRINGIANQGDEADTLICSKSSQEKRSRKTSAVKEPIHQSMKRQRSEVL	890

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g01890	890	Gene3D	-	77	261	IPR023214	-
	Spst1g01890	890	SMART	forpap2	90	234	IPR004274	-
	Spst1g01890	890	MobiDBLite	consensus disorder prediction	516	535	-	-
	Spst1g01890	890	NCBIfam	dullard-like phosphatase domain	92	255	IPR011948	GO:0016791
	Spst1g01890	890	Gene3D	HORMA domain	284	554	IPR036570	-
	Spst1g01890	890	PANTHER	HORMA DOMAIN-CONTAINING PROTEIN 1	281	887	-	-
	Spst1g01890	890	MobiDBLite	consensus disorder prediction	801	822	-	-
	Spst1g01890	890	FunFam	Meiosis-specific protein ASY2	284	553	-	-
	Spst1g01890	890	MobiDBLite	consensus disorder prediction	846	890	-	-
	Spst1g01890	890	ProSiteProfiles	HORMA domain profile.	294	509	IPR003511	-
	Spst1g01890	890	SUPERFAMILY	HAD-like	81	257	IPR036412	-
	Spst1g01890	890	Pfam	NLI interacting factor-like phosphatase	93	253	IPR004274	-
	Spst1g01890	890	SUPERFAMILY	The spindle assembly checkpoint protein mad2	290	516	IPR036570	-
	Spst1g01890	890	ProSiteProfiles	FCP1 homology domain profile.	87	246	IPR004274	-
	Spst1g01890	890	CDD	HAD_FCP1-like	93	224	-	-
	Spst1g01890	890	MobiDBLite	consensus disorder prediction	801	826	-	-
	Spst1g01890	890	FunFam	CTD small phosphatase-like protein 2	80	260	-	-
	Spst1g01890	890	Pfam	HORMA domain	296	502	IPR003511	-
	Spst1g01890	890	MobiDBLite	consensus disorder prediction	859	890	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g01890	Spst-Chr1	27052138	27060850	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g01890	K12778		-	sind:105168412	1187.56

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst1g01890	1	27052138	27060850	Spst1g01890	1	27052138	27060850	ECH