Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01889 ATGGCCAAGACTGAGGTTGGTTGGCAAAATTCTATTTATTTGGAAGTAACGGTTGAGAGCAAGAACAAAGACCTAAAGCACCTGGGGTTTGTGAGGGTTGCTGCTATTCAAACCTTTGTGTTTGTGTCAAATCTGTATGAGTACGCAAAGCAAAATTCTGGACCTTTGAGATCTGCCGTCGGAACAGTGGAAAACACTGTAACCACCGTTCTTGGTCCTGTATGCAACAAACTCAAGGACTTCCCTGATGATGTCCTGGTTTTTGTTGACAAAAAGGTGGATGAAGCTACACACAAGTTCGATGAGCATGCTCCTCCTGTTGCTAAGCAACTTGCGGATCAAGCCAAGGCTTTGATTCAGAAAGTGACACAAGAGGCAGGGAAAGTTGTAAGTCAAGCTCAATCTGGAGGGACAAGAGCAGCTGTGCATTATGTTGCTACAGAGTCAAAGCATTTTTTGTTGATAAATTCAGTGAAGCTGTGGAATGGACTCAACCACTATCCACCATTCCACGCTCTGGCGGAGATGGCAGTTCCCACTGCTGCACACTGGTCAGAGAAGTATAACCATGTGATCAAGACCATGACTCAAAAGGGTTACTGTTTCATTGGGTATCTCCCCTTGATTCCCATTGATGAGATAGCCAAGGCATTTAAGCAGGGTCAGGGGAACTTGAAAGCAGATGATGCAGCCAATGTTGAACAGATATCAGAATCATCATCTGATTCTGATTAA 735 0.4435 MAKTEVGWQNSIYLEVTVESKNKDLKHLGFVRVAAIQTFVFVSNLYEYAKQNSGPLRSAVGTVENTVTTVLGPVCNKLKDFPDDVLVFVDKKVDEATHKFDEHAPPVAKQLADQAKALIQKVTQEAGKVVSQAQSGGTRAAVHYVATESKHFLLINSVKLWNGLNHYPPFHALAEMAVPTAAHWSEKYNHVIKTMTQKGYCFIGYLPLIPIDEIAKAFKQGQGNLKADDAANVEQISESSSDSD 244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01889 244 Pfam Rubber elongation factor protein (REF) 20 220 IPR008802 -
Spst1g01889 244 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 19 236 IPR008802 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g01889 Spst-Chr1 27049079 27050562 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01889 - - gmx:100816931 395.971