Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01866 ATGTCTGCTGCTGTGTCCTCCACAACTTCTCGTTTAGAGGAAGAGCTCAAGAACAAAGCATCAGACAACAACAACAATGTTGGTGGGGAACCAGACCAGCCCCCTTACAGTGATGGTGCCAACTCTGATGTTGCAGAAGAAACTGAGCCAGAGGAAGATGATGACTCCAGGTTGGAATCTGACAGAGAACTGGATATTGGTCCCCAAATCACTCTCAAGGAGCAGCTTGAGAAAGATAAAGATGATGAGAGTTTGAGAAAATGGAAGGAACAACTTCTGGGAAGTGTGGATTTGTCTGTCGTTAAAGAAATCAAAGACCCTGATGTGAAGATATTGAGCCTCACCATTACAAGCCCGGACAGGCCAGACCTCATCCTGCCAATTCCATTTACAAATGATCCTAAGAAAAGTCTCTTCATCCTTAAGGAAGGAAGCAAATGCGCCATGAAATTCACCTTCACTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACAAATATTATCTGGAAAACTGGCGTTAGAGTGGCCAGCAGAAAAAAGATGTTGGGAACTTTTAGCCCCCAGAAGGAACCATATACATATGCATTGGAAGAAGAAAGTACTCCTTGTGGCATGTTCGTTAGGGGAACCTATGCGGCAAGAACCAAGTTTGTAGATGACGATCAAAAATGCTACTTGGATGTCAATTACTACTTCGAAATTCAGAAGAGTTGGGCAAAACCACAATGA 732 0.4344 MSAAVSSTTSRLEEELKNKASDNNNNVGGEPDQPPYSDGANSDVAEETEPEEDDDSRLESDRELDIGPQITLKEQLEKDKDDESLRKWKEQLLGSVDLSVVKEIKDPDVKILSLTITSPDRPDLILPIPFTNDPKKSLFILKEGSKCAMKFTFTVSNNIVSGLKYTNIIWKTGVRVASRKKMLGTFSPQKEPYTYALEEESTPCGMFVRGTYAARTKFVDDDQKCYLDVNYYFEIQKSWAKPQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01866 243 PANTHER RHO GDP-DISSOCIATION INHIBITOR 47 240 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Spst1g01866 243 FunFam Rho GDP-dissociation inhibitor 1 62 241 - -
Spst1g01866 243 Gene3D Coagulation Factor XIII, subunit A, domain 1 62 241 IPR024792 -
Spst1g01866 243 MobiDBLite consensus disorder prediction 1 70 - -
Spst1g01866 243 Pfam RHO protein GDP dissociation inhibitor 51 237 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Spst1g01866 243 MobiDBLite consensus disorder prediction 44 59 - -
Spst1g01866 243 SUPERFAMILY E set domains 45 239 IPR014756 -
Spst1g01866 243 PRINTS RHO protein GDP dissociation inhibitor signature 218 235 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Spst1g01866 243 PRINTS RHO protein GDP dissociation inhibitor signature 176 191 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Spst1g01866 243 PRINTS RHO protein GDP dissociation inhibitor signature 99 114 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Spst1g01866 243 PRINTS RHO protein GDP dissociation inhibitor signature 159 175 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01866 Spst-Chr1 26842202 26843710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01866 K12462 - gmx:100797593 399.438