Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01865 ATGGAGAGTGTGTTTCCGAATCCGATGGAGTGTCTGGGAAAAGGGTTTGATTTGACAAGTGATTTTCGAATGAAGTTTGCCAAGGGAAAAGGAAGTAGAAGATTGGTGGTGGTTGATGAAGAGAACAAGAGGGACATTACTGTTCCTGGTACTGTTGTTACCATACCCAATGTTTCCCAGGATATTCGCTGTGACAAGGGGGATCGCCTTCGCTTCAAATCTGATGTTCTTCAATTCAACCAGATGTCTGAGTTGCTAAATCAAAAATCGGCAATACAAGGAAAAATTCCATCTGGCTATTTCAATGCTCTTTTTGATCTGAGTGGTGATTGGTTTCGTGATGCTCATGACATCAAGTGTCTTGCTTTTGATGGTTATTTCATTTCCCTGTACTATTTGCACCTTACTCCTTCACACCTCGTACTGCAAGAGGAAGTGAAAAATTCTGTTCCAGCTCAGTGGGACCCAGCTTCACTAACCAGGTTCATTCAAACATATGGAACACACATAATAGTAGGTATGGCTGTTGGAGGTCAAGATGTATTATGTGTCAAACAAAAGCATTCTTCAAAGGTTTCACCTGGTGATCTAAAAAGACATTTAGAGAATCTAGGAGATTTTTTGTTTCAGGATTTAAGAAGCCCTTCTCGACAACAAACTAACACCTCCACAGAAGCCAAACAAAAAGTTCCTGAGGTCTTCAATCGTGTGATGCAATCAAACACAACGCAGTTCACCAGCATTTCAGAAACTTCAAGCAAGGATGGCCTCACTATCATTTGTTCAAAAAGAGGAGGAGATGTGTTCAAGCATTGTCACTCAAATTGGCTCCAGACAGTGGCTTCTAATCCTGAAGCAATCCTCTTCAAGTTTGTTCCTATTTCCTCACTTCTCACAGGAATTCCAGGAGGTGGCTATCTTAGTCATGCAATCAATTTGTATTTACGCTATAAGCCCCTTCTCGAAGATTTACAATGCTTCTTGGAGTTTCAAATTCCAAGGCAATGGGCACCCATGTTTTATGAGCTACCTCTGAGGCATCAAAGGAAAAAGACTACTTCCCCTTCCCTGCAATTTGGTTTCATGTCTCCCAAGCTTCATGTCAGTTCTGCACAGGTAGTGAGTGAAAAAAAGCCTGTGGTAGGCCTCCGTTTGTACTTGGAAGGAAGAAAATGTGATAGACTTGCAATACATGTACATCATCTTTCAAGCCTCCCAAAAACAATGATCCTCTCTTCAAGCACATCTTTGTGGCGAGGATCTGATGATAATGAATTCTGTGACACCTTTCTGGAACCAATAAGGTGGAAGGGATTTGCAAACGTGTGCACCGCAGTGGTCAAACATGACCCCAACTGGTTGCATTACACAAGTGGTAGTGGTGTTTATATAGTAACCGGTGCACAACTCATTAGCAAAGGGAATTGGCCAAAGAACGTTCTTCACTTGCGCCTCCAATATACTCACATACCCAATTGCAGTATCAGGAAGTCAGATTGGGGTGGTGCTCCTGAGGCTTCAAGAAAATCATCTTTCCTCACAAATTTAAGCACAACATTTTCATTCACACAGCAAAGTGTCACTGCTTCTCCTCAGAAACAGGCTCCAACTGCGCTTGACTCTGGTGTTTATCCAGATGGTCCACCTGTGCCTGTTCGTTCGGGAAAACTGCTTAAATATGTGGATACAAGCGAGGTTCTGCGGGGGCCACATGATGCTCCTGGACATTGGTTGGTAACAGCTGCTAGGCTTGTGACTGAGGGTGGTAAGGTTGGATTACTGGTCAAGTTTGCAGTGTTAGACTACTAG 1809 0.4301 MESVFPNPMECLGKGFDLTSDFRMKFAKGKGSRRLVVVDEENKRDITVPGTVVTIPNVSQDIRCDKGDRLRFKSDVLQFNQMSELLNQKSAIQGKIPSGYFNALFDLSGDWFRDAHDIKCLAFDGYFISLYYLHLTPSHLVLQEEVKNSVPAQWDPASLTRFIQTYGTHIIVGMAVGGQDVLCVKQKHSSKVSPGDLKRHLENLGDFLFQDLRSPSRQQTNTSTEAKQKVPEVFNRVMQSNTTQFTSISETSSKDGLTIICSKRGGDVFKHCHSNWLQTVASNPEAILFKFVPISSLLTGIPGGGYLSHAINLYLRYKPLLEDLQCFLEFQIPRQWAPMFYELPLRHQRKKTTSPSLQFGFMSPKLHVSSAQVVSEKKPVVGLRLYLEGRKCDRLAIHVHHLSSLPKTMILSSSTSLWRGSDDNEFCDTFLEPIRWKGFANVCTAVVKHDPNWLHYTSGSGVYIVTGAQLISKGNWPKNVLHLRLQYTHIPNCSIRKSDWGGAPEASRKSSFLTNLSTTFSFTQQSVTASPQKQAPTALDSGVYPDGPPVPVRSGKLLKYVDTSEVLRGPHDAPGHWLVTAARLVTEGGKVGLLVKFAVLDY 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01865 602 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 5 602 IPR044663 GO:0006952|GO:0012501|GO:2000031
Spst1g01865 602 SMART MACPF_8 118 316 IPR020864 -
Spst1g01865 602 MobiDBLite consensus disorder prediction 527 547 - -
Spst1g01865 602 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 328 IPR020864 -
Spst1g01865 602 Pfam MAC/Perforin domain 101 314 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01865 Spst-Chr1 26835054 26838967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01865 - - gmx:100818022 1044.26