Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01857 ATGACTTCGATGATGGCTGTGACTCTCACGATCCTCGTGACCTTTCTCTCGGTTCTCTCTTCTGCATCGTGTGCTCGAATGGTCGGGGGGAAGGCGGAGATCCCTGACGTGAGAACAAACAGGGAAGTGCAAGAACTTGGGAGATTCTCGGTGGAGGAGTACAACCACGGTTTGAAGCTGTGGGGGAACTACAGCGACAATGAGAGAGAGAAATTGAACTTTTCAGAAGTGGTGGAGGCGCAGCAACAAGTTGTGTCAGGGGTGAAGTACTATTTGATGATCTCAGCCACTCATAAAGGGGTTCACAAAATGTTCTCCTCAGTGGTGGTGGTTAAGCCATGGCTTCATTCCAAACAGCTCCTCCACTTTGCACCAGCATCCACCAGCAACACCAAGCAGTGA 402 0.505 MTSMMAVTLTILVTFLSVLSSASCARMVGGKAEIPDVRTNREVQELGRFSVEEYNHGLKLWGNYSDNEREKLNFSEVVEAQQQVVSGVKYYLMISATHKGVHKMFSSVVVVKPWLHSKQLLHFAPASTSNTKQ 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01857 133 CDD CY 29 123 IPR000010 GO:0004869
Spst1g01857 133 ProSitePatterns Cysteine proteases inhibitors signature. 82 95 IPR018073 -
Spst1g01857 133 PANTHER CYSTEINE PROTEINASE INHIBITOR 2 4 128 - -
Spst1g01857 133 SMART CY_4 26 126 IPR000010 GO:0004869
Spst1g01857 133 Gene3D - 24 133 - -
Spst1g01857 133 Pfam Aspartic acid proteinase inhibitor 39 124 IPR000010 GO:0004869
Spst1g01857 133 SUPERFAMILY Cystatin/monellin 34 127 IPR046350 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01857 Spst-Chr1 26779443 26779844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01857 - K13899 gmx:100775792 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01857 1 26779443 26779844 Spst1g01857 1 26779443 26779844 ECH