Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01843 ATGGCATTGCCAATGGTGCCATTTTCTTCTGTGATCTTTCATTCCTTCAACTGCACTTCCCTTCCAGTTCCATTCACTTCACATTTTGTTCGCCGCCTTCCATGTCACTGCTCACTCTCTTCCCACCCTTTTTCACATTCCCTTCGGTATGTTCACCAACAACTACTTTTACCATGGGGGAGACAGCCACCAAGGACAAGGATATGTGCTTCAATTACAGATGTTTCAGTAGATGTAGCTGTAGAGGAAAAACGGCTCCCCAAAGGAGAAACTTGGTCTGTTCACAAGTTTGGTGGAACTTGTGTGGGAAACTCATCGCGAATAAAGAATGTTGCAGACATAATTATTAATGACAATTCTGAGAGGAAATTTGTTGTGGTCTCTGCTATGTCAAAGGTGACTGATATGATGTATGATCTTATCCACAAGGCTCAATCCCGCACCGAGTCTTATGTTTCTGCCCTGGACGCGGTTTTAGAGAAGCACAGTTCAACTGCACATGACCTACTTGCTGGAGAAGATCTTTCTACATTTTTATCCCAGTTGCATCAAGATATCAGTAACCTCAAAGCAATGCTTCAGGCCATATACATTGCTGGTCATGCAACAGAATCCTTTACTGACTTTGTCGTGGGACACGGAGAGTTGTGGTCTGCACAGATATTGTCTTTAGTAATTAAGAAACGTGGGATTGACTGCAAATGGATGGATGCGAGGGAAGTTCTTGTTGTGAATCCTACTCGTTCTAATCAAGTTGATCCGGACTACTGGGAATCCGAACGAAAACTTGAGGAATGGTACTCTCTAAATCCATCTGATGTAATCATTGCCACAGGATTTATTGCAAGCACACGTCAGAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCGGCAGCTATTATGGGTGCTCTCTTTAAGGCTCGTCAGATCACAATTTGGACAGATGTAGATGGCGTGTATAGTGCAGATCCAAGAAAAGTTGGTGATGCTGTGATTTTGAAGACATTGTCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCCAATGTCCTACATCCACGCACCATTACTCCAGTTATTCAATATGGCATACCCATTATAATAAGGAATATTTTCAACCTTTCTTCTCCTGGAACAATGATCTGCCATCCTTCTATTATTGGTGATGAAGATAGGCTGATATTTAAAAATTATGTCAAAGGCTTTGCAACAATAGACAACTTGGCACTAGTAAATGTTGAGGGAACCGGAATGGCTGGTGTTCCGGGAACTGCAAGCGCTATTTTTGCTGCAGTAAAAGATGTTGGAGCTAATGTTATAATGATATCACAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTTCCTGAGAAAGAAGTAAAAGCTGTTGCTGAGGTGTTACAGTCTTTATTTCATGGCGCTTTGGATGCTGGTCGTCTTTCTCAGGTTGCAATCGTTCCAAATTGTAGTATTTTGGCAGCTGTCGGCCAGAAAATGGCAAGTACTCCGGGAGTCTGTGCCACCCTTTTCGATGCATTGGCTAAGGCCAACATAAACGTGCGTGCTGTAGCACAAGGTTGTTCTGAGTACAACATCACCGTAGTTGTAAAGCGGGAGGATTCTATAAAGGCTTTACGGGCTGTTCATTCCAGATTTTATCTCTCAAAAACCACCATAGCAATGGGCATTATTGGCCCTGGATTAATTGGAAGTACACTGCTTGACCAGCTAAGAGATCAGGCTGCAATTCTGAAAGCGGAACTTAACATTGAGTTGCGTGTAATGGGGATCATGGGTTCTAAGCTGATGCTCCTTGACGATGATACGGGCATCAACTTAGGCAAATGGAGAGAACTTCGAGAAGAAAAAGGAGAAGTGGCTAATTTGGAAAAATTTGTTCAAAATGTGCATGGAAATCATTTTATACCAAACACTGTATTAGTGGACTGCACAGCCGACTCCTTCATTGCAAGCAATTATGCTGATTGGCTGCGCAAAGGAATTCATGTGATCACTCCCAATAAGAAGGCAAATTCAGGACCACTTAATGAGTATTTAAGGTTAAGAGTTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGGGCCGGTCTTCCAATTATTAGCACTTTACGGGGCCTTCTTGAGACTGGTGACAGAATATTGCAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAACAACTTCAAAGATGGACGGCTTTTTAGTGAGGTAGTAGCTGAAGCAAGGGATGCAGGTTATACTGAGCCTGATCCAAGGGAGGACCTGTCAGGAACTGATGTTGCTAGAAAGGTGATAATTCTTGCGAGGGAATCAGGCTTGAAGCTGGAGCTTTCTGATATTCCCGTGGAAAATCTCGTGCCAGAATCATTAAGACTTAGTGCATCAGCTGAAGAGTTTATGCAACAATTGCCAAAATTTAACCAGGAATTAACAGAGAAACTAAAAGATGCAGAGAGTGCTGAAGAAGTGTTGAGATACGTGGGAGTGGTGGACGTGAGAAATAGCAAAGGAGTAGTAGAGCTGAGAAGGTACAAGAAGGATCATCCATTTGCACAAGTAACAGGATCAGATAATATGATTGCCTTCACAACAAGAAGGTACAAAAACCAGCCTCTCATTGTTCGTGGACCTGGAGCTGGTGCCCAAGTCACTGCTGGCGGAATATTTAATGACATCTTACGACTTGCCTCATATCTTGGTGCTCCATCATAG 2769 0.4261 MALPMVPFSSVIFHSFNCTSLPVPFTSHFVRRLPCHCSLSSHPFSHSLRYVHQQLLLPWGRQPPRTRICASITDVSVDVAVEEKRLPKGETWSVHKFGGTCVGNSSRIKNVADIIINDNSERKFVVVSAMSKVTDMMYDLIHKAQSRTESYVSALDAVLEKHSSTAHDLLAGEDLSTFLSQLHQDISNLKAMLQAIYIAGHATESFTDFVVGHGELWSAQILSLVIKKRGIDCKWMDAREVLVVNPTRSNQVDPDYWESERKLEEWYSLNPSDVIIATGFIASTRQNIPTTLKRDGSDFSAAIMGALFKARQITIWTDVDGVYSADPRKVGDAVILKTLSYQEAWEMSYFGANVLHPRTITPVIQYGIPIIIRNIFNLSSPGTMICHPSIIGDEDRLIFKNYVKGFATIDNLALVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLQSLFHGALDAGRLSQVAIVPNCSILAAVGQKMASTPGVCATLFDALAKANINVRAVAQGCSEYNITVVVKREDSIKALRAVHSRFYLSKTTIAMGIIGPGLIGSTLLDQLRDQAAILKAELNIELRVMGIMGSKLMLLDDDTGINLGKWRELREEKGEVANLEKFVQNVHGNHFIPNTVLVDCTADSFIASNYADWLRKGIHVITPNKKANSGPLNEYLRLRVLQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEARDAGYTEPDPREDLSGTDVARKVIILARESGLKLELSDIPVENLVPESLRLSASAEEFMQQLPKFNQELTEKLKDAESAEEVLRYVGVVDVRNSKGVVELRRYKKDHPFAQVTGSDNMIAFTTRRYKNQPLIVRGPGAGAQVTAGGIFNDILRLASYLGAPS 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01843 922 NCBIfam aspartate kinase 92 556 IPR001341 GO:0004072|GO:0008652
Spst1g01843 922 Gene3D - 399 558 - -
Spst1g01843 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 91 388 - -
Spst1g01843 922 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 560 736 IPR036291 -
Spst1g01843 922 CDD AAK_AK-HSDH 92 386 IPR041743 -
Spst1g01843 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 725 896 - -
Spst1g01843 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic 619 742 - -
Spst1g01843 922 SUPERFAMILY Carbamate kinase-like 93 387 IPR036393 -
Spst1g01843 922 ProSitePatterns Homoserine dehydrogenase signature. 760 782 IPR019811 GO:0006520
Spst1g01843 922 Gene3D - 564 914 - -
Spst1g01843 922 Gene3D Dihydrodipicolinate Reductase; domain 2 725 896 - -
Spst1g01843 922 Gene3D - 92 388 IPR036393 -
Spst1g01843 922 Pfam ACT domain 491 554 IPR027795 -
Spst1g01843 922 Pfam ACT domain 421 475 IPR002912 -
Spst1g01843 922 ProSiteProfiles ACT domain profile. 498 575 IPR002912 -
Spst1g01843 922 ProSitePatterns Aspartokinase signature. 94 102 IPR018042 GO:0004072|GO:0008652
Spst1g01843 922 CDD ACT_AKi-HSDH-ThrA_2 493 558 - -
Spst1g01843 922 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 714 899 - -
Spst1g01843 922 CDD ACT_AKi-HSDH-ThrA-like_1 412 491 - -
Spst1g01843 922 Pfam Homoserine dehydrogenase, NAD binding domain 569 706 IPR005106 GO:0016491|GO:0050661
Spst1g01843 922 SUPERFAMILY ACT-like 483 572 IPR045865 -
Spst1g01843 922 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 400 558 - -
Spst1g01843 922 Coils Coil 578 598 - -
Spst1g01843 922 ProSiteProfiles ACT domain profile. 417 486 IPR002912 -
Spst1g01843 922 PANTHER - 75 922 IPR011147 GO:0004072|GO:0004412|GO:0009067
Spst1g01843 922 Pfam Amino acid kinase family 93 374 IPR001048 -
Spst1g01843 922 SUPERFAMILY ACT-like 401 476 IPR045865 -
Spst1g01843 922 Pfam Homoserine dehydrogenase 714 912 IPR001342 GO:0006520
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01843 Spst-Chr1 26604369 26610178 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01843 K12524 - gmx:548017 1450.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01843 1 26604369 26610178 Spst1g01843 1 26604369 26610178 ECH