Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01842 ATGGAGAAGCAAGGAAGCAAGCCAACGACAGAGGAACCGCTGACAAGAAGGTACTCCCCATTTCTAGAAAGTTCATTGCTCACTGGTAATGGTGTTGGGGCCTCAGACGAGTGGAAAGCTGTTCCTGATATTTGGAGATCTTCTGCTGAAAAGTATGGTGACAAAATTGCATTAGTAGATCCGTATCATGATCCTCCTTCATCTATGACGTATAAACAGTTGGAGGATGCAATATTGGACTTTGCTGAAGGATTGAGAGTAATTGGAGTAAGACCCTATGAGAAGCTTGCACTTTTCGCTGATAATTCTTGTCGCTGGCTTGTAGCAGATCAAGGTATGATGGCATGTGGGGCAATCAACGTGTTCTTAGAACTGACGAGGAATGCATCTAAATTTGCTAGAGCTCTGTTATGTGTTGCACTAGCTGTCGACAATCCTGAAATGTTTAATCGGATTGCAGAACTGTTTTATTTGAAGGCTTCAATAAGATTTATTATTCTGCTTTGGGGAGAAAAATCGGGCCTAGTCAGTGAAGGAGACAAGGAGGTGCCTATATATACTTTCATGGAAGTCATACATTTGGGACGTGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATAATAGGAAGCACTACATATATGAAGCAATAGAATCTGATGACATTGCTACTCTTGTATACACAAGTGGAACTACTGGGAATCCTAAAGGTGTTATGCTAACCCATCGGAATCTTTTGCATCAGATAAAAAACTTAGGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGTTACCTTCCTGGCATGCATATGAAAGAGCTTCTGAGTATTTCATTTTCTCCTGCGGTGTTGAACAAGTATACACAACTGTGAAAAAGTTAAAGGGTGATTTGAGACATTATCAGCCACATTACTTGATTTCTGTTCCTTTAGTATATGAAACTTTATACAGTGGGATCCAAAAGCAGATATCCACAAGCTCTCTAGTTAGAAAGCTTGTTGCACTGACATTCATAAGGGCCAGCTTAAGGTACATGGAATGCAAGCGTATTTATGAGGGAAAATGTCTAACAAAGGATCAAAAGCCGCCTTTGTATCTACATTCAATGTTGGATTGCTTATGGGCTAGAGTTATTGCCACAATATTATTTCCAGTTCATTTGCTGGCGAAGAAACTGGTCTATACTAAACCCTCTGGCACTATGCAGGCTGGAATAAGTGGTGGTGGTAGCCTATCCTCTCACGTGGATAGATTTTTTGAGGCTATTGGTGTGACTGTGCAGAATGGATATGGTTTAACAGAAACTTCACCGGTTGTTGCTGCTCGACGGCTTAGTTGTAATGTTATTGGGTCTGCTGGGCATCCAATTAAGCATACAGAATTCAAAGTCATAGATTCTGAGACTGATGAAGTTCTCCCACCTGGTTCAAAGGGAATTTTGAAAGTCCGAGGTCCACAATTGATGAAGGGATACTACAAGAATCCTTCCGCTACAAATCAGGTCTTAGATAGGGATGGCTGGCTGAATACTGGGGATATTGGTTGGATTGTTCCGCATCATTCAACTGGGCGGAGTCGAAATTCCGGCGGAGTAATTGTTGTGGATGGTCGTGCTAAAGACACTATTGTGCTTTCTACAGGTGAAAATGTTGAACCGGGAGAGCTTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATAGTTGTTATTGGACAGGATAAGCGACGTCTAGGGGCTATCATTGTTCCTAACAAAGAAGAAGTCTTAAAGGCAGCAAGGGACTCATCAATTATAGATTCCAACAGTTCAGATAATCTCCTTCGGTTACACTCAAGTGGTTTAGAAAGTTGCAAGCGCCTTGCAAAAGAAGTATGA 1890 0.4159 MEKQGSKPTTEEPLTRRYSPFLESSLLTGNGVGASDEWKAVPDIWRSSAEKYGDKIALVDPYHDPPSSMTYKQLEDAILDFAEGLRVIGVRPYEKLALFADNSCRWLVADQGMMACGAINVFLELTRNASKFARALLCVALAVDNPEMFNRIAELFYLKASIRFIILLWGEKSGLVSEGDKEVPIYTFMEVIHLGRESRRVLFDSLDNRKHYIYEAIESDDIATLVYTSGTTGNPKGVMLTHRNLLHQIKNLGDIVPAEVGDRFLSMLPSWHAYERASEYFIFSCGVEQVYTTVKKLKGDLRHYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFIRASLRYMECKRIYEGKCLTKDQKPPLYLHSMLDCLWARVIATILFPVHLLAKKLVYTKPSGTMQAGISGGGSLSSHVDRFFEAIGVTVQNGYGLTETSPVVAARRLSCNVIGSAGHPIKHTEFKVIDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSGGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRSSLIHQIVVIGQDKRRLGAIIVPNKEEVLKAARDSSIIDSNSSDNLLRLHSSGLESCKRLAKEV 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01842 629 SUPERFAMILY Acetyl-CoA synthetase-like 39 597 - -
Spst1g01842 629 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 6 609 - -
Spst1g01842 629 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Spst1g01842 629 Gene3D - 403 449 - -
Spst1g01842 629 Gene3D Luciferase; Domain 3 450 520 - -
Spst1g01842 629 Pfam AMP-binding enzyme 47 548 IPR000873 -
Spst1g01842 629 Gene3D - 36 353 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01842 Spst-Chr1 26579811 26603497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01842 10 601 Acyl Lipid Metabolism Gene Families AT4G14070 67.774 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01842 K01897 - gmx:100782583 1059.28