Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01839 ATGGAAACGTTTCAGTTATTCTCTTCCTCTGCTTCCGGCTTCGGAATCTTCGATGAAGCCGCACAACATTCGCCTACCATACCCCCTCCTCCTTGCGTTGAAGTCCTCGCTTCTGAGGTTCCTTCATCCGCCAAACACAACGTGGAGTCTGTAAATTTGGATGGAGTTACATTGTTAAAGGGGCGCGTGAGTACCCAACAAGTTTTTGGTTTGTCCAACTCCGACTTAATTCCCGGAAAATATGAAGGAGGACTGAAGCTGTGGGAAGGTTCACTTGATTTAATTAAAGCCCTTCGTTCAGATATGAAAGCCGGGCTTATATCATTTCGTGGGAAGCGAGTATTAGAGGTAGGATGCGGCCATGGATTGCCTGGAATATTTGCTTTGCTCGAGGGGGCAGCTGCTGTACATTTTCAAGACTTCAATGCTGAGGTCCTAAGTTGCCTCACCATTCCTAATTTAAATGCAAATATTTCTGGAAAATCTCAAGCATCATCATCCAACCTAACAATTTGTGACAAAGCAGAAGTTCGCTTTTTTGCTGGTGACTGGAGTGGAATTGATAAACTGCTCCCTCATGTTAGTACAGATGATAATCGTGGTGATGGTTATGACTTTATTCTGATGGCTGAAACAGTTTACTCGGTCAGCAGTCTCCAAATTCTCTATAATCTTATCAAGAAGTGCTTGCAACATCCTGATGGAGTGGTGTACATGGCAGCAAAGAAGTATTATTTTGGAGTAGGCGGTGGAACTCGGAGATTTTTGTCTCTGGTAGAAAAGGATGGTGTCTTGACTAGTAGCCTGGTTGCTGAAATCACAGACGGTTCATCTAATGTGCGTGAAGTATGGAAGCTTGCATACAAGTAG 870 0.4391 METFQLFSSSASGFGIFDEAAQHSPTIPPPPCVEVLASEVPSSAKHNVESVNLDGVTLLKGRVSTQQVFGLSNSDLIPGKYEGGLKLWEGSLDLIKALRSDMKAGLISFRGKRVLEVGCGHGLPGIFALLEGAAAVHFQDFNAEVLSCLTIPNLNANISGKSQASSSNLTICDKAEVRFFAGDWSGIDKLLPHVSTDDNRGDGYDFILMAETVYSVSSLQILYNLIKKCLQHPDGVVYMAAKKYYFGVGGGTRRFLSLVEKDGVLTSSLVAEITDGSSNVREVWKLAYK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01839 289 Gene3D Vaccinia Virus protein VP39 64 274 IPR029063 -
Spst1g01839 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 242 IPR029063 -
Spst1g01839 289 Pfam Lysine methyltransferase 84 244 IPR019410 -
Spst1g01839 289 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 55 270 IPR019410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01839 Spst-Chr1 26563193 26566739 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01839 - - gmx:100790201 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01839 1 26563193 26566739 Spst1g01839 1 26563193 26566739 ECH