Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01838 ATGCATACTTCAATTCAATATCAAATGGATAAATCAGCCCTCATGTCCCGGTGTTGCTACGATAACCACCACTTCTGCTTTGCGATTCTCTTCTCCATTCTCTTCTGCTCTTTATTCTTATCCTTTCGTGCTCCCAACCACGCACTTACATTCAAACAACTCAACCCATCCAACGCCAAAAATCTCACCACCAACACTCATTCCTGCATTGGCCGCTATGTTTACATTCACCAACTCCCTTCCCGCTTCAACAATTACTTGCTTCACAACTGCCACTCCCTTACCAGAGGCACTGACAAACCCAACATGTGTCCATACATGCAAAACATGGGCTTAGGTCCTCAGATTGCCACCTCTCAAGGTGTTTTCACCAACAACAGTTGGTATGCCACCAACCAATTCTTGTTGGAGGTCATTTTTCACAACAGGATGAGGAAATATGGCTGCTTGACCAACGATTCCTCCTTGGCCTCTGCAATCTTTGTCCCATTTTATGCTGGTCTTGACGTTAGCCGTTTCCTTTGGCTCTCTAATCTCACAGATAGAGACTCCTCTGGTCGAGATCTTGTTCAATGGCTCGCAAACAGACCCGAGTGGAAGAAAATGTGGGGCAGAGACCATTTCCTTATTTCTGGGAGGATTGCTTGGGATTTTAGGAGACAACGCGATGATGAGTCCTATTGGGGTAGTAAGTTCAGATTTCTTCCCGAATCCATGAACATGTCCATGTTAGCAGTTGAAGCAAGTTCGTGGAACAATGACTATGCAATACCCTACCCAACTTCTTTCCATCCCTCAAAAGACACTCAAGTTTTGCAATGGCAGAGAAAAATCAGACAACAAAAGCGGCCGCACTTGTTTACTTTCACTGGAGCTCCAAGGCCTGAACTTGAAGGTTCTATCAGGGGTAAGATAATAGACCAGTGTCGAGCTTCGAGTGTTTGCAAATTCGTCGACTGCAGTTATGGTATAGAGAGATGTGACGATCCCATCAATGTTATAAAGGTGTTTCAAAGTTCTGTGTTTTGTTTGCAGCCTCCCGGTGACTCGTACACCAGAAGGTCCATATTTGATTCTATGTTGGCTGGTTGTATTCCCGTTTTCTTTCATCCTGGCAGTGCTTATTCACAGTACAAGTGGCATTTACCTAAGAATAGGAGTAGTTACTCTGTGTATATACCCGTGAAAGATGTAAAACAATGGAATGTCAATGTCGAACAGGTGTTGCTGGGAATTCCAGAGGGTGATGTCTTAGCTATGAGGGAGGAGGTTATAAAGGTGATTCCAAATATTATTTATGCAGATCCTAGGTCAAAGTTAAATAACTTTGAAGATGCATTTGATTTAGCAGTAAAAGGAATGCTTGAAAGAATAGAGAAAGTGAGGGAAGCAACGAGGAGAGGCATAGATCCTAGCATTGGTTTTGCAGATGAAGACCATTATAAATATACATTTTCACAAAATTAA 1467 0.4288 MHTSIQYQMDKSALMSRCCYDNHHFCFAILFSILFCSLFLSFRAPNHALTFKQLNPSNAKNLTTNTHSCIGRYVYIHQLPSRFNNYLLHNCHSLTRGTDKPNMCPYMQNMGLGPQIATSQGVFTNNSWYATNQFLLEVIFHNRMRKYGCLTNDSSLASAIFVPFYAGLDVSRFLWLSNLTDRDSSGRDLVQWLANRPEWKKMWGRDHFLISGRIAWDFRRQRDDESYWGSKFRFLPESMNMSMLAVEASSWNNDYAIPYPTSFHPSKDTQVLQWQRKIRQQKRPHLFTFTGAPRPELEGSIRGKIIDQCRASSVCKFVDCSYGIERCDDPINVIKVFQSSVFCLQPPGDSYTRRSIFDSMLAGCIPVFFHPGSAYSQYKWHLPKNRSSYSVYIPVKDVKQWNVNVEQVLLGIPEGDVLAMREEVIKVIPNIIYADPRSKLNNFEDAFDLAVKGMLERIEKVREATRRGIDPSIGFADEDHYKYTFSQN 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01838 488 Pfam Exostosin family 69 408 IPR040911 -
Spst1g01838 488 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 72 453 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01838 Spst-Chr1 26560013 26561479 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01838 - - gmx:100780962 849.351