Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01825 ATGAAGAAAGTGGAGGAGGAGAGTGGTTTCACGCGCCTTGCCTCATTCGTCTGCGAATGTGAGCATTTCACGGAGGAAGAACTCCTAGCTATTGAAGCTTCTCTTTCAAACCCTAACAAATTACGTCGATTCAACGATCACACTCCCCGCCGCCGCTTGCCCACATCGCTTATCGCTCTTCAAGCCTCAAATTCTTCTTCTTTATCCCCTCTTCCAGGCTATTCAAGAATGAGATTACCTGTAATGAAGTTTAGTGGTCAAATTCTATACAGCAGGACTTCTAATGCTGTAGAAAAAGCTGCGACACAACTCTTACAAGTTCTGGATGAAAAAAATACAAAGATAAAGCAAATTGCAATTGGACTTGACATTGAGTGGAAACCCTCCTTCAGAAAAGGAAGCAGAGCATTTCTATCGGTAGCCGTCATGCAGATATGTGTGGACAGTAGTCATTGTCATGTTCTGCATCTAATTCATTCCGGAATCCCTCAAAATTTACAGCTTTTGCTTGAAAATCCCGAAGTCATGAAGGTTGGAGTTGGGATTCACGGTGATGCTACGAAGTTTTTTAGAGATTATAAAATATCTGTTAAAGGTATGATGGATCTTTCTTTTCATGCTAATAAAAAGCTTGGTGGTGATCACAAGTGGGGTCTTTCATCTTTGACAGAAAAACTTTTATCGAAACAGCTTAAAAAGCCCAATAAAATAAGACTGGGAAATTGGGAGACTCCTGTTTTGTCAAAGGAGCAACTACAGTACGCTGCAACAGATGCTTTTGCTTCTTGGTGTCTTCATCAGGCAATCAAAGATCTCCCGGAAGCCCAAGAAGTCAAGGACATAAAGGAATGA 852 0.4131 MKKVEEESGFTRLASFVCECEHFTEEELLAIEASLSNPNKLRRFNDHTPRRRLPTSLIALQASNSSSLSPLPGYSRMRLPVMKFSGQILYSRTSNAVEKAATQLLQVLDEKNTKIKQIAIGLDIEWKPSFRKGSRAFLSVAVMQICVDSSHCHVLHLIHSGIPQNLQLLLENPEVMKVGVGIHGDATKFFRDYKISVKGMMDLSFHANKKLGGDHKWGLSSLTEKLLSKQLKKPNKIRLGNWETPVLSKEQLQYAATDAFASWCLHQAIKDLPEAQEVKDIKE 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01825 283 PANTHER 3-5 EXONUCLEASE 64 268 - -
Spst1g01825 283 CDD WRN_exo 92 270 - -
Spst1g01825 283 SMART 35exoneu6 88 274 IPR002562 GO:0003676|GO:0006139|GO:0008408
Spst1g01825 283 Pfam 3'-5' exonuclease 108 270 IPR002562 GO:0003676|GO:0006139|GO:0008408
Spst1g01825 283 SUPERFAMILY Ribonuclease H-like 119 269 IPR012337 -
Spst1g01825 283 Gene3D - 74 276 IPR036397 GO:0003676
Spst1g01825 283 FunFam Werner Syndrome-like exonuclease 72 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01825 Spst-Chr1 26478719 26482696 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01825 K22807 - gmx:100801291 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01825 1 26478719 26482696 Spst1g01825 1 26478719 26482696 ECH