Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01821 ATGGGGAAAACACAAGATAACGTGGTTGGCCTTATATTGGCTGTCTCTTCCAGCGTCTTCATTGGTTCAAGCTTTATAGTTAAAAAAATGGGTCTTAAAAAGGCTGCCAACAACGGCAAAAGAGCAGCCACGGGAGGCCATTCCTATCTCTACGAACCCTTTTGGTGGTTCGGAATGATTTCAATGATCGCTGGGGAAATAGCCAATTTCGCCGCTTACGCTTTCGCTCCAGCAATCCTTGTAACTCCTTTGGGAGCTCTAAGCATCATTTTCAGTTCAGTGCTAGCTCACTTCATATTGAAAGAGAGACTGCACATTTTTGGCGTGCTTGGGTGTGCCCTGTGTGTGGTGGGATCTACGACTATTGTTTTGCATGCACCAAAGGAGAAAGACATTCATTCTGTGAAGGAAGTGTGGCACCTTGCTACAGAACCAGGTTTTCTCGTGTACATTTGCATTGTTGCGGTAGTAGTTTTCGTCCTTATTTTCCGATTTGTGCGAACCCATGGGCAGAGTCATATGTTGGTATATATTGGAATATGTTCTCTCACCGGTTCCATTACGGTTATGGGTGTGAAAGCAGTTGGAATTGCTTTGAAGCTTACATTTGAAGGCTTGAATCAGTTTATTTACTTTGAGACCTGGCTATTTACAGTGGTTGTAGTAGGATGTTGCCTTACGCAGATTAACTACTTGAACAAGGCTTTGGACACCTTTAACACTGCTGTGGTATCACCAGTTTACTACGTCATGTTCACATCATTTACAATAATCGCCAGCGTTATCATGTTTAAGGAATGGGCGAAGCAGGATGCATCGCAGATTGCTACAGAGATGTGTGGGTTTGTGACAATTTTATCAGGGACCTTCCTCCTCCACAGAACTAAGGATATGGGAAGTAAACCCTCGGAAGCCACCATTTATTCAAGTCCAGATCTACTAAATCATCCTGATAATACCAAGACACCTCAAACCGACCAAATTTGA 987 0.4336 MGKTQDNVVGLILAVSSSVFIGSSFIVKKMGLKKAANNGKRAATGGHSYLYEPFWWFGMISMIAGEIANFAAYAFAPAILVTPLGALSIIFSSVLAHFILKERLHIFGVLGCALCVVGSTTIVLHAPKEKDIHSVKEVWHLATEPGFLVYICIVAVVVFVLIFRFVRTHGQSHMLVYIGICSLTGSITVMGVKAVGIALKLTFEGLNQFIYFETWLFTVVVVGCCLTQINYLNKALDTFNTAVVSPVYYVMFTSFTIIASVIMFKEWAKQDASQIATEMCGFVTILSGTFLLHRTKDMGSKPSEATIYSSPDLLNHPDNTKTPQTDQI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01821 328 Pfam Magnesium transporter NIPA 5 298 IPR008521 GO:0015095|GO:0015693|GO:0016020
Spst1g01821 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 127 - -
Spst1g01821 328 PANTHER UNCHARACTERIZED 7 310 IPR008521 GO:0015095|GO:0015693|GO:0016020
Spst1g01821 328 MobiDBLite consensus disorder prediction 302 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01821 Spst-Chr1 26448058 26451201 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01821 K22733 - gmx:100785617 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01821 1 26448058 26451201 Spst1g01821 1 26448058 26451201 ECH