Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01816 ATGCATAGCAATGTAGGTACATTCATATGTGAACTGAGTGCACTGCAATTGGGTCCTGAAATGGGTTACTGGGTTGTATTGTGTTTGTCAGTGTTGTACTTGTCATTGAGTTCAGTGATTGTTGATGGTGACGATGAACATCCCATCCCTACCACTCTGGAAGGACCCTTCAACCCTGTCACCGTTCCGCTCGATCAGAGCTTCCGAGGCAACGCCGTAGATTTGCCAGACACCGATCCTCTCCTTCAGAGAACCGTTAAAGGCTTCCAACCGGAACAAATCTCTCTCTCCCTCTCGGCTTCTCACCACTCTGTTTGGATTTCTTGGATTACAGGGGAATTCCAAATTGGGGATAATATAGAACCCTTGGATCCTAAAACTGTTTCGAGCATAGTTCAGTATGGAAGGTTTGGAAGGCCTATGAATCACCGAGCTACGGGTTATTCCCTCGTTTACAGTCAACTATATCCTTTTGAAGGTCTTCATAACTACACCTCTGGAATTATACATCATGTTCGTCTCACAGGATTGAGACCCAACACGCTCTATCAATATGAATGTGGAGATCCTTCTTTGTCAGCAATGAGTGATGTTCACTACTTCAGGACTATGCCAGTTTCTGGGCCCAAGAGCTACCCTAACAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAATACCACATCCACTGTTAACCATATGACCAGTAACCATCCTGATCTTATTCTGTTGGTTGGAGATGTTAGTTATGCCAACCTCTATCTTACTAATGGTACTGGGGCAGACTGCTATTCTTGCGCATTTCCTAACACTCCAATCCATGAAACGTATCAACCTCGTTGGGATTATTGGGGAAGGTACATGCAGCCGCTTATTTCTTGCGTACCAATAATGGTAATAGAAGGGAATCATGAGATAGAAGCACAAGCTGAAAACCACACATTTGTTGCATATAGTTCTCGATTTGCATTCCCATCAGAAGAGAGTGGATCATCGTCCACTTTCTATTATTCTTTCAATGCTGGAGGGATACATTTTATAATGCTCGGGTCCTACATATCGTATAACAAATCAGGGGACCAGTACAAGTGGTTGGAGAGAGACTTGGCTTCTGTTGACAGGGAAGAAACTCCGTGGTTGGTAGCTACTTGGCATGCACCTTGGTACAGCACCTACAAAGCACATTATAGAGAAGCAGAGTGTATGAGGGTAGAGATGGAAGACTTGCTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAACCGGGTATACAACTACATATTGGATCCTTGTGGTCCTGTTTATATCACGGTTGGTGATGGTGGTAACAGGGAAAAGATGGCAATCACACATGCTGATGAACCTGGACAGTGTCCAGAACCATCAACTACGCCAGATGACTTTATGGGTGGTTTCTGCGCCTTTAATTTTACATCCGGTCCAGCAGCAGGTAACTTCTGTTGGGATCGACAGCCGGATTATAGTGCTTTCAGAGAAAGTAGCTTTGGCCATGGCATTCTGGAGATGAAAAATGCAACCCATGCACTGTGGATTTGGCATCGCAATCAAGACTTTTATGGTAGTGCTGGAGATGAGATTTTCATTGTTAGGCAACCTCAAAACTGTCCACCATTCAAGCCAGGGTGGTGGCGAAGGATCTCTGAAGCCCGAAGGGGTGTCTCTTCTACTGTAACATGTGTTGTAAGAAATGTCTGTGTGTTCCCTCGGGAACCTATGGCCACAAGGAAGAATGTCCCTGTTATAACAACTGGAAGAACAGGAAGGGAACACCCAAGTGTCCCTGATTCAACCTAA 1845 0.4461 MHSNVGTFICELSALQLGPEMGYWVVLCLSVLYLSLSSVIVDGDDEHPIPTTLEGPFNPVTVPLDQSFRGNAVDLPDTDPLLQRTVKGFQPEQISLSLSASHHSVWISWITGEFQIGDNIEPLDPKTVSSIVQYGRFGRPMNHRATGYSLVYSQLYPFEGLHNYTSGIIHHVRLTGLRPNTLYQYECGDPSLSAMSDVHYFRTMPVSGPKSYPNRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSYANLYLTNGTGADCYSCAFPNTPIHETYQPRWDYWGRYMQPLISCVPIMVIEGNHEIEAQAENHTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGSYISYNKSGDQYKWLERDLASVDREETPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYILDPCGPVYITVGDGGNREKMAITHADEPGQCPEPSTTPDDFMGGFCAFNFTSGPAAGNFCWDRQPDYSAFRESSFGHGILEMKNATHALWIWHRNQDFYGSAGDEIFIVRQPQNCPPFKPGWWRRISEARRGVSSTVTCVVRNVCVFPREPMATRKNVPVITTGRTGREHPSVPDST 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01816 614 SUPERFAMILY Purple acid phosphatase, N-terminal domain 69 205 IPR008963 GO:0003993|GO:0046872
Spst1g01816 614 FunFam Purple acid phosphatase 210 472 - -
Spst1g01816 614 Gene3D - 210 480 IPR029052 -
Spst1g01816 614 Gene3D - 483 553 IPR029052 -
Spst1g01816 614 Pfam Calcineurin-like phosphoesterase 215 427 IPR004843 GO:0016787
Spst1g01816 614 Gene3D - 90 206 - -
Spst1g01816 614 PANTHER ACID PHOSPHATASE RELATED 29 550 IPR039331 GO:0003993
Spst1g01816 614 SUPERFAMILY Metallo-dependent phosphatases 215 536 IPR029052 -
Spst1g01816 614 Pfam Iron/zinc purple acid phosphatase-like protein C 442 534 IPR025733 -
Spst1g01816 614 CDD MPP_PAPs 210 547 IPR041792 -
Spst1g01816 614 Pfam Purple acid Phosphatase, N-terminal domain 91 203 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01816 Spst-Chr1 26357638 26363327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01816 91 453 Miscellaneous Gene Families AT1G13900 24.519 2.70e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01816 K22390 - gmx:100784006 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01816 1 26357638 26363327 Spst1g01816 1 26357638 26363327 ECH