Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01814 ATGAGTGCAGAGATTGATTCAACTTCTGCTCCTGAACCTCACAAATTGTCTGGAGCTTCATCTGCAGCCACTACTAGTGGCCAAAAGCTCTCTATATTTGCTGCCAAGTCAGGATTTGTCATCCCTAAAAATAAATTATCGGGGTCACTGGTCCCTATTTTCCGAGGGGCTAAGAAACACGGTGTCACTGGATCCATCAATGAAGAAAGTTCGAAACAAATTGAGAGGAGATCCAAATGGGGACCTGATCTGACACAAGATGCAACTGTCAGGAGGGGAAAGGCTTTAGCTTTGCAGATTCGAGTGGATCAAATTACAAAGCAGTTGGAATCAGAAAAACTGGAAGTTGGGGACACTCAGAACTTTCCATTGGGAGCTGAGAATTCAGATCAAAACAAATCTGGCTCTCAAATTAACAGCAAGAAGTCAGAAATGCTTGAACTTGAAAAGCGGGAAGCAATAGGTGAAATACTAAAATTAGATCCCAGTTACAAGCCTCCACGTGGTTTCAAACCATTGTTAAAAGAAGCCAGCATTCCTTTGCCTGTCCAAGAATATCCTGGGTACAATTTTGTTGGTCTGATATATGGGCCTGAAGGTGATAATCAAAAACAACTAGAAAAGGAAACTGCTGCCAAGATAAGAATTCACGGAACCAAGGCAGACACAGGAGAGAGAGGTGAAATTAAACCTGGAACTGATATCCAGTGCAGCTACAAAGAGATGTATGTTAACATATCAGCTGATAGTTATGAAAAAGTGGATGCAGCAATGTCAATCATTGAACTGCTAATTACCTCTGTAACTGGGAATTTAGCCGCTGGTTCTACACCCTCTATATCAGTTTCTAGGGACAGCCCTAATCTTCTGTGTCAAAGCCAAGAAGGTCACCCTTCTCATGCAGATTCTGTATCTCTGGAAAATCAGGCTGTGTTGCAACCAGTAGCTATTACCCAAATGCATGGAGATAACTTTCAATACTCTACACCATGGTTTTCAGTGGTTCCATCTAACACCCCTGTGTTTGCTTCATCTGGCTCTGTGGCCCCCCCAAATCCATTAGGTCTTGCCAGAACTCCCCAATTTCCATCGCAAACTTCAAACACGGTTCCTTCTTTTGGTGCTCAACCTGGAATTGCTATCGGATTTCAACCAATTATTCCAAATCATCATGTTTCTGTGCAAGCACTACCACCAAGACAGATTTTACACTATCCACATTTAACGCAGGCAAGTCCTTTGGGTCACGGTGGTCCCCCAAGAAATGCATCTATAATATCTGTACAGAATCTGCCAACTCCAACAAATGCTTCACTTTCCTTTCCTGTTACTTTAAGCCAACCAACGCCAGTAGGACAACTGCAGAATTCAGTGTCTTCGTTGCATCTACCTATATCTGGTGTATCACCGTTGCCAATACCTAACCAGCCCATCACCCATCATGGGGTCCCTTCTGGCCAGAATGAAGCCCTTGTCACTGTTAAAACATCTATTGGTCCAAGCAATATGGGGTCAATGGCTCCACCTGGAAGACCTGCGTCTCTACATCAACAACCGGATGTTGCATTGAGGCCACTACAGTCAAATATGTCAATGATGCCACGGTCTGCCTCCTTTCCTCCATATCAAGTAGGAATATCCCTTGGACCACTATCTTCTTTAAGACCAATGTCTGTACCAATCCCTGCACCTACACCTTCATCTGTAAACCATTTATCGGGACCTGTTTCATTTCCTTCATCTGGAATATCCCCTTCACTTCCATTGCCTCAGCAAGCAGGAATACCTAATTCTGCTTCTAGAGTTTCCCCTTATCACACTCATGTAAAACCATCCGTCATGGTGCCATCAAAATCTGGAAATTTTACTTTTCAATCGCATCCCCCCAATGCAGATTACAGTCAAGTAGTTTCTGGACCAAACAGTCAAGCAGGTGCTACACAAGAGCCACCTTCTGGTCCTCGGCCTCCACCATTTGGGTTTACTGCGCCAGATCAGGCTCCTCAAATCTTTCCAAGGACACAATTCCCCGCTCAAGTGGATCAAACCATTCTTTTCGGGGGAAGATCAGGTTCCATCTCGAACTCAATTCCAGCACCCAGACATACTACATTTCCATATGGTGGTCAACCTGCACCTAGATCTCCAGTCCCACAAATGGGTATGAAGAATTTAATTTCTGCTCCGCAAAGGCCAAACTTGACCAGTGCTGTTGCCCAAAGAGGCATGCCTATTCGACAAAGCTATCCTGTTCATATGGCACGACCAGATATCCCAATTCCCTTAAATCACAAGTTTGTCAACAATCCCTTCGTGGCTTCTGGTAAGCCACCATATTCTGCGGACCAAATTTATGACCCTTTTTCACCCACTTCTGCACCTCCACTACAGAAAGGTAATCCTGGAAAATGA 2412 0.4424 MSAEIDSTSAPEPHKLSGASSAATTSGQKLSIFAAKSGFVIPKNKLSGSLVPIFRGAKKHGVTGSINEESSKQIERRSKWGPDLTQDATVRRGKALALQIRVDQITKQLESEKLEVGDTQNFPLGAENSDQNKSGSQINSKKSEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGYNFVGLIYGPEGDNQKQLEKETAAKIRIHGTKADTGERGEIKPGTDIQCSYKEMYVNISADSYEKVDAAMSIIELLITSVTGNLAAGSTPSISVSRDSPNLLCQSQEGHPSHADSVSLENQAVLQPVAITQMHGDNFQYSTPWFSVVPSNTPVFASSGSVAPPNPLGLARTPQFPSQTSNTVPSFGAQPGIAIGFQPIIPNHHVSVQALPPRQILHYPHLTQASPLGHGGPPRNASIISVQNLPTPTNASLSFPVTLSQPTPVGQLQNSVSSLHLPISGVSPLPIPNQPITHHGVPSGQNEALVTVKTSIGPSNMGSMAPPGRPASLHQQPDVALRPLQSNMSMMPRSASFPPYQVGISLGPLSSLRPMSVPIPAPTPSSVNHLSGPVSFPSSGISPSLPLPQQAGIPNSASRVSPYHTHVKPSVMVPSKSGNFTFQSHPPNADYSQVVSGPNSQAGATQEPPSGPRPPPFGFTAPDQAPQIFPRTQFPAQVDQTILFGGRSGSISNSIPAPRHTTFPYGGQPAPRSPVPQMGMKNLISAPQRPNLTSAVAQRGMPIRQSYPVHMARPDIPIPLNHKFVNNPFVASGKPPYSADQIYDPFSPTSAPPLQKGNPGK 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01814 803 MobiDBLite consensus disorder prediction 620 668 - -
Spst1g01814 803 Gene3D - 89 167 IPR047086 -
Spst1g01814 803 MobiDBLite consensus disorder prediction 620 649 - -
Spst1g01814 803 MobiDBLite consensus disorder prediction 119 144 - -
Spst1g01814 803 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 177 271 IPR036612 GO:0003723
Spst1g01814 803 MobiDBLite consensus disorder prediction 1 26 - -
Spst1g01814 803 MobiDBLite consensus disorder prediction 122 142 - -
Spst1g01814 803 FunFam Splicing factor-like protein 1 isoform A 175 278 - -
Spst1g01814 803 PANTHER RNA-BINDING PROTEIN RELATED 27 638 IPR045071 -
Spst1g01814 803 Gene3D K Homology domain, type 1 170 291 IPR036612 GO:0003723
Spst1g01814 803 ProSiteProfiles Type-1 KH domain profile. 190 261 - -
Spst1g01814 803 MobiDBLite consensus disorder prediction 579 604 - -
Spst1g01814 803 MobiDBLite consensus disorder prediction 778 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01814 Spst-Chr1 26342703 26347193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01814 K13095 - gmx:100777227 1235.32