Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01813 ATGGTTTCCAAAAGCAAAAGGGTGAGGGATGTAGCATTCTCCTCCACCATCTTGCTGTTACTGTTGGTTGGCTTTGCAAACTCAGATTTAGCCAAAGACAGAGAAGAGTGTGCAGACAAACTAATGGAGCTGGCTAGCTGTGTTCCTTACGTTGGTGGTGAGGCCAAAACCCCAACCATAGACTGCTGCAGTGGCCTCAAAGTGGTCCTTGACAAGAGCAAGAAATGCATCTGCATCCTCATCAAAGATCGAGATGACCCCAATCTTGGCATCAAGATCAACGCCACTCTGGCTATTCAACTGCCTTCTGCTTGCAACGCACCTGCTAATATATCTAATTGTGTAGATCTTTTGCATTTAGCACCTAACTCTCCTGATGCTAAGGTGTTTGAGGGATTCCAAAAATCAGCCAAAACAAACACTTCCACCCCAGTTTCCAGTGCTCCAGGTGGTGCTGAGAAGGGATCAAGTTCAAGCTCTAGTGGTGAGGAAAAGAGTGGTGTGTCCGCAAAGAGGTGGCCGGTGGCACACCTGCTTTCCTCTGTCCTACCACTTCTTTTCATTCTTGTTTGA 573 0.4712 MVSKSKRVRDVAFSSTILLLLLVGFANSDLAKDREECADKLMELASCVPYVGGEAKTPTIDCCSGLKVVLDKSKKCICILIKDRDDPNLGIKINATLAIQLPSACNAPANISNCVDLLHLAPNSPDAKVFEGFQKSAKTNTSTPVSSAPGGAEKGSSSSSSGEEKSGVSAKRWPVAHLLSSVLPLLFILV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01813 190 Gene3D - 34 114 IPR036312 -
Spst1g01813 190 Pfam Probable lipid transfer 29 114 IPR016140 -
Spst1g01813 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 36 115 IPR036312 -
Spst1g01813 190 CDD AAI_LTSS 44 106 - -
Spst1g01813 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 22 157 IPR043325 -
Spst1g01813 190 MobiDBLite consensus disorder prediction 138 166 - -
Spst1g01813 190 SMART aai_6 37 114 IPR016140 -
Spst1g01813 190 MobiDBLite consensus disorder prediction 138 167 - -
Spst1g01813 190 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 34 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01813 Spst-Chr1 26339481 26340233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01813 13 171 Acyl Lipid Metabolism Gene Families AT1G55260 49.068 4.44e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01813 - - pvu:PHAVU_001G268300g 291.197