Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01805 ATGGCCATGACCACGACCATGAGCGTGGGTGTGGCATCAACCACCACCACCAGTCTCATTTTCCCTCGCAACCGCTCTTGCTCCCACTCTCCAATTCAAAATAAAATCCATCTCCCCCGTCGAATCCGATCCAAATTAAGCATTGATGCAGAGGACCAAGTTCAATCTCGCGTGTGGAATTGGAGGGGTTACTCTATTCGCTATCAACATTCTGGGAAAAATGGCCCTGCTCTACTTTTAGTCCACGGTTTTGGAGCTAACAGTGACCACTGGAGGAATAATATTTCAGTTCTTGCACAGTCCCACCGGGTCTACTCCATTGATCTCATTGGATATGGATATTCAGATAAACCAAATCCTCGTCAAATCGGAGACCATTCCTTTTACACTTTTGAAACGTGGGCTTCTCAATTAAATGAGTTTTGTCTTGATGTCATCAAGGATGAACCATTCTTTATATGCAATTCTATTGGAGGAGTCGTTGGACTTCAAGCAGCTGTGGTAGCACCACACGTTTGTCGGGGCATTATCCTTCTCAATATATCTTTGCGTATGCTTCATATAAAGAAGCAGCCTTGGTATGCAAAACCTTTCATCAGCTCATTCCAGAGATTGCTTAGGGATACTGCAGTAGGCAAATTCTTCTATAAAACTATTGCCACAAAAGAGTCTGTGAGGAACATTCTTTGCCAGTGCTATCATGACACCTCCAAAGTGACAGATGAGCTAGTGCAGATCATCCTTGGTCCAGGTCTGGAACCTGGAGCTGCAGAGGTCTTTCTTGAGTTCATTTGTTATTCAGGTGGCCCTCTTCCGGAGGAACTACTACCTCAAGTAAAGTGCCCAGTTTTGATTGCTTGGGGTGACAAGGATCCTTGGGAACCAATTGAGCTTGGAAGAAATTATGAAAATTTTGACTTTGTCGAAGATTTTGTTGTCATTCCAAATGTTGGACATTGCCCCCAGGATGAAGCACCTCATATTGTGAACCCACTTGTGGAGTCTTTTGTGGCACGCCATGCTAAATCCTCATCCAGTACCTCAATTGTTAATTGA 1056 0.4413 MAMTTTMSVGVASTTTTSLIFPRNRSCSHSPIQNKIHLPRRIRSKLSIDAEDQVQSRVWNWRGYSIRYQHSGKNGPALLLVHGFGANSDHWRNNISVLAQSHRVYSIDLIGYGYSDKPNPRQIGDHSFYTFETWASQLNEFCLDVIKDEPFFICNSIGGVVGLQAAVVAPHVCRGIILLNISLRMLHIKKQPWYAKPFISSFQRLLRDTAVGKFFYKTIATKESVRNILCQCYHDTSKVTDELVQIILGPGLEPGAAEVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRNYENFDFVEDFVVIPNVGHCPQDEAPHIVNPLVESFVARHAKSSSSTSIVN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01805 351 Pfam Alpha/beta hydrolase family 78 330 IPR000073 -
Spst1g01805 351 Gene3D alpha/beta hydrolase 33 344 IPR029058 -
Spst1g01805 351 SUPERFAMILY alpha/beta-Hydrolases 54 337 IPR029058 -
Spst1g01805 351 FunFam Os07g0575800 protein 146 340 - -
Spst1g01805 351 PRINTS Alpha/beta hydrolase fold signature 283 297 IPR000073 -
Spst1g01805 351 PRINTS Alpha/beta hydrolase fold signature 152 165 IPR000073 -
Spst1g01805 351 PRINTS Alpha/beta hydrolase fold signature 101 116 IPR000073 -
Spst1g01805 351 PANTHER HYDROLASE 52 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01805 Spst-Chr1 26256809 26260204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01805 69 339 Miscellaneous Gene Families AT1G80280 25.256 1.29e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01805 - - gmx:100818723 614.379