Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01804 ATGGCAATTGGAGGGATAATTGTTGTGCTATTGCTATGCCTCTTGTCGGTGGTGCGGGGGGAAGACCCCTATCTCTTCTTTACATGGAACGTTTCATACGGCACCCTCTCTCCGTTGGGTATACCCCAGCAAGTCATTCTCATCAACGGCAAATTCCCAGGACCCAATATCAATTCCACCAGCAACAACAACGTTGTTGTCAATATCTTCAATAATCTTGACGAGCCTCTTCTTTTTACATGGCATGGAGTCCAACAAAGAAAGAATTCGTGGCAAGACGGCGTTCCCGGAACAAACTGCCCCATTTCTCCAGGGACAAACTACACGTACCGTTTCCAGGTGAAGGACCAGATAGGTAGTTTCTTCTACTACCCGAGCACAGGCATGCACAGGGCAGCTGGTGGTTTTGGTGGGCTCCGCATAAACAGCCGATTGCTCATTCCTGTGCCATACCATGATCCCGAGGACGAATACACGGTTGTGATGTGTGACTGGTACACAAAGAGCCACACCACTCTGAAGAAGTTCTTGGATAGTGGTCGCTCCATTGGCAGGCCTGAAGGTGTTCTCATCAACGGCAAAAATGCTAAAGGTGACGGAAAAGACGAGCCACTGTTCACGATGAAGCCCGGAAAGACCTACAAATACCGCGTATGCAATGTAGGGATTAAGAACTCCCTCAACTTCAGGATCCAAGGTCACTCGATGACGCTGGTTGAGATGGAAGGATCCCACGTGGTGCAAAACGCCTACGACTCTCTGGACCTCCATGTAGGGGGGTGCGTCTCTGTCCTTGTAACCGCAGACAAGGAGCCAAAGGATTACTACATAGTGGCTTCCACGCGTTTCACCAAGTCTGTTCTGACAGGTAAAGGCATCATCCGTTACACAAATGGTAACGCTGGTCCCTCGTCTGACATCCCCGAAGCTCCAACTGGCTGGGCTTGGTCTCTCAATCAATTCCGTTCCTTCCGCTGGAATCTCACTGCCAGTGCCGCCAGACCCAACCCTCAGGGTTCTTACAAATACGGTAAGATCGATATCACCCGTACCATCAGAATCGTCAACTCCGTTAAAAGGGAACAGGGTAAGATTCGCTATGCCCTCAATGGTGTCTCCCACGTCGACACCGAAACTCCACTCAAGCTAGCTGAATACTATGGAGTTGCTGACAAGGTTTTCCAATATAATTCTATCCAAGACGACCCACCCGCTAGCGTTGTAAACAATATCGAAATTAAAGCAAATGTTCTGAACATTACCCATCGTAAATTCGTCGAGATCATCTTTGAGAATCCTGAAAAATCAATCCAGTCATATCACTTGAATGGTTATGCGTTCTTCGCAGTCGCCATAGAGCCCGGCACATGGGCGCCAGATAAAAGGATTAACTACAACGCTCTGGATGCCGTGAGCAGACACACAATTCAGGTCTTCCCAAAATGTTGGGCCGCCGTCATGCTGTCATTCGATAACGTTGGAATGTGGAACCTGAGATCCATGATTGCTGAAAATCAGTATCTTGGCCAGCAGCTATACATTAGTGTTATAACCCCCGAGCGTTCTCTCAGAGACGAGTACACTATGCGAGATGAACAACTCCTTTGCGGTATTGTTAAGGATTTGCCAAGGCCACCACCATACGTCTAA 1650 0.4855 MAIGGIIVVLLLCLLSVVRGEDPYLFFTWNVSYGTLSPLGIPQQVILINGKFPGPNINSTSNNNVVVNIFNNLDEPLLFTWHGVQQRKNSWQDGVPGTNCPISPGTNYTYRFQVKDQIGSFFYYPSTGMHRAAGGFGGLRINSRLLIPVPYHDPEDEYTVVMCDWYTKSHTTLKKFLDSGRSIGRPEGVLINGKNAKGDGKDEPLFTMKPGKTYKYRVCNVGIKNSLNFRIQGHSMTLVEMEGSHVVQNAYDSLDLHVGGCVSVLVTADKEPKDYYIVASTRFTKSVLTGKGIIRYTNGNAGPSSDIPEAPTGWAWSLNQFRSFRWNLTASAARPNPQGSYKYGKIDITRTIRIVNSVKREQGKIRYALNGVSHVDTETPLKLAEYYGVADKVFQYNSIQDDPPASVVNNIEIKANVLNITHRKFVEIIFENPEKSIQSYHLNGYAFFAVAIEPGTWAPDKRINYNALDAVSRHTIQVFPKCWAAVMLSFDNVGMWNLRSMIAENQYLGQQLYISVITPERSLRDEYTMRDEQLLCGIVKDLPRPPPYV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01804 549 Gene3D - 153 334 IPR008972 -
Spst1g01804 549 SUPERFAMILY Cupredoxins 21 171 IPR008972 -
Spst1g01804 549 Gene3D - 344 539 IPR008972 -
Spst1g01804 549 SUPERFAMILY Cupredoxins 152 335 IPR008972 -
Spst1g01804 549 PANTHER MULTI-COPPER OXIDASE 43 512 IPR045087 -
Spst1g01804 549 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Spst1g01804 549 CDD CuRO_2_AAO_like_1 156 296 IPR034271 -
Spst1g01804 549 SUPERFAMILY Cupredoxins 346 527 IPR008972 -
Spst1g01804 549 Gene3D - 25 145 IPR008972 -
Spst1g01804 549 CDD CuRO_1_AAO_like_1 25 142 IPR034273 GO:0005507
Spst1g01804 549 Pfam Multicopper oxidase 157 297 IPR001117 -
Spst1g01804 549 Pfam Multicopper oxidase 396 520 IPR011706 GO:0005507|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01804 Spst-Chr1 26252490 26254338 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01804 K00423 - gmx:100782413 902.508